Cyclopterus lumpus (lumpfish): 117745601
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Entry
117745601 CDS
T09199
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117745601 (irx4a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117745601 (irx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117745601
NCBI-ProteinID:
XP_034409929
Ensembl:
ENSCLMG00005004426
LinkDB
All DBs
Position
16:5912681..5918781
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AA seq
483 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGSQGYGNYVTYGTDASAFYSLGTFDTKDPTASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEDGSQEEQIKSENNEDET
RSRPDKDLQLSDLDDFDTLESESSECELKHRYLMNTHMTTTGDCPAEHLIKDASLKISIP
VSLGGEQDLSKSCLKTNQEDFQPAKVCYSQQQQQQQQQQQAGHQLLDGKPRIWSLAQTAT
SLNQTEYPSCMLRCQPPPPSSLTPSPAATSPVTVLDNGQDSPVTTLRNWVDGVFHDPLFR
HSTLSQALTNTTVSWTTNTKDAMLEAERSAAALQQQQQQQHHHDSSKDSAMSFPKTINKL
FCS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccctactcgtctgctccacaattcctgatgacaacc
aactctctgaccacttgctgcgagtccaccggcagatccatagccgactccggagtggcg
gcgtccgggcagacaccagtctactgccccgtgtacgagagccggctgctggccacggcg
aggcatgaactcagctcagccgccgcgctgggcgtgtacgggagtccctacactggcagt
caaggctatgggaattacgttacatacggcaccgatgcctcggcattctactcgctgggc
acattcgacactaaagaccccacagcttctgcgcatgcgggaataacccaggcaaccgcc
tactatccttatgatcctaccttgggacagtaccagtatgacagatatggttccatggat
gggggaacaaggcggaagaacgccacgcgggagacgaccagcactctaaaagcctggctg
caggaacacaggaagaacccgtaccccactaaaggggagaagatcatgctggccatcatc
accaagatgaccctgacgcaggtctccacgtggttcgccaacgccaggcggaggctcaag
aaggagaacaagatgacgtggccgcccaggaacaagggctcagaggagaagagatatgac
gaggatgaagatgggtctcaggaggagcagataaaaagcgagaacaatgaggatgagacc
agaagtcggcctgataaagacctgcagttgagcgatttggacgatttcgacacgctcgag
tccgagagctcggagtgcgagctgaaacaccgatacctcatgaacacgcacatgacgacg
acgggcgactgccccgcggagcacctcatcaaggacgcgtctctgaaaatctccatccct
gtttccctgggaggggagcaggacttgagcaaaagttgtctcaaaacgaaccaggaggat
ttccagcctgccaaagtgtgttatagccaacagcagcagcagcagcagcagcagcagcag
gcagggcaccagctattagacggcaagcctcggatctggtctttggcacaaactgcgacg
tccctgaaccagactgagtacccgtcctgtatgctgaggtgccagccgccgcccccctcc
tcgctcactccatcccccgccgctacctcacctgtgaccgtcctggacaacgggcaggac
tcgccggtcacgaccctgagaaactgggtggacggagttttccacgaccccttgtttagg
cacagcactttgagccaggctctgaccaacaccaccgtctcttggaccacgaacaccaaa
gacgccatgctggaggctgagaggagcgcggcggccttgcagcagcagcagcagcagcag
caccaccatgactcctccaaagacagtgccatgagtttcccaaaaactatcaacaaactt
ttctgctcctaa
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