Cyclopterus lumpus (lumpfish): 117745613
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Entry
117745613 CDS
T09199
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117745613 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117745613 (prpf3)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117745613 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
117745613
NCBI-ProteinID:
XP_034409953
Ensembl:
ENSCLMG00005002646
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All DBs
Position
16:11136902..11143643
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AA seq
703 aa
AA seq
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MSLPKREVEEMRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTADQLRPFLDDSAG
GFVECLFEALEESRSSRGNKGAGEKHRKRDLKDVFGDETEIGVVRETPEIKEVVAPKRKR
VPRFEEVEEPEVIPCPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSSVPAAQSQM
EIPQISRLLGTAAAAGGGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGIL
GALGNAGPHNLVALANLHAMGIAPPKVEIREVNKPTPLILDDKGRTVDASGKEVELTHRM
PTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVSITPAQRLRRGFKFHDQGRFEKI
AQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKVIGDGSVPHIEWWDSYILPYN
VDISVDTSFEELELFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQ
KEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKVHEDANAA
RKLTAEQRKEKNVKRLKEDLSDGVHIAVYRIRNLHNPAKKFKVEANANQLYLTGTVVLHR
DVNLVVVEGGPKSQKKFKKLMLHRIKWEEHNSKRDDPDADDDTKRNNKCWLIWNGTAKER
NFGEMKFKQCPTENMAREHFKKHGTEHYWDLALSKSVLDNPDD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtcgaggagatgaggccatgggtggagcggactgtaaag
aaggtcctgggtttctcagagcccactgtggttactgctgctttgcactgtgttggaaaa
ggactggacaaaaggaagaccgcggaccagctacgtcccttccttgatgactctgctgga
ggttttgtggagtgtctttttgaagctttggaggaaagccgcagttcacgtggcaacaaa
ggagcaggagaaaagcaccgcaagagagacctcaaggatgtttttggtgatgagactgaa
attggtgtcgtacgagaaactccagagataaaagaagtggtggcaccaaagagaaaacgg
gttcctcgcttcgaggaggtagaggaacctgaggtcataccttgtcctccatctgagagc
cctggcatgctcaccaaaatgcagataaaacagatgatggaagccgctacaaaacagatt
gaagagaggaagaaacaattgagcttttcctcttcagtccctgcagcacaatcacagatg
gaaatccctcaaatctcacggcttctcggcacagccgctgctgcaggcggaggtggtgcc
tcatctatcgctccgtcccaggctgccagttttatgaatgatgctatcgagaaggcccgc
aaggctgctgagcttcaggcccgcatccagtcccaattagccatgaaacctggtatcctc
ggagccctggggaacgctgggccccacaacctagtggcactagctaatttacacgctatg
ggaattgccccaccgaaagttgaaatcagggaggtgaacaagccaacccctcttattctg
gatgacaagggaagaactgtggatgctagtggcaaagaggttgaactcacacaccgcatg
ccaacactgaaagctaacattcgagcggtaaagagggagcagttccgtcagcagctgaag
gagaagcctggggaggacttggagtccacatcctacttcgaccaacgtgtgtctattaca
ccagctcagcgccttcgcaggggcttcaaattccatgaccaagggcgctttgagaagatt
gctcagagaataagaactaaggcccagttggaaaggttgcagaatgagattgcccaggca
gcaaagaagacaggaatccaggcttccaccaagttggcactgattgcccctaagaaagta
attggagacggctcggtgccccacattgagtggtgggactcctacatcctgccctacaac
gtagacatatcagtcgacacatcatttgaagagttggagctctttggtgtgaccaatctg
gtagaacatcctgcccaaatcagccctccagttgacacagataagccagtaacgctgggc
gtttacctgacaaagaaagaacagaagaaactaagaagacagacacgtagggagggacaa
aaagaagtccaagagaaggttcgtctgggactgatgcctccaccagaacccaaagtacgc
atctctaacctgatgagagtgctggggacggaggccgttcaggaccccacgaaggtggag
gcccacgtcagagcgcagatggccaagagacagaaggttcatgaggatgccaatgcagcc
cgcaagctcacagcggagcagaggaaagagaagaacgtcaagaggctaaaagaagacctc
agtgatggtgttcacattgcagtgtacaggatccgtaacctgcacaaccctgctaagaag
tttaaagtggaggccaatgccaaccagctctacctgacaggcactgtagttctgcacaga
gatgtcaaccttgttgtggtggagggaggccctaaatcccagaaaaagttcaagaagctg
atgttgcatagaatcaaatgggaggaacacaacagtaaaagagatgatccagatgccgat
gatgatacaaagcggaacaacaagtgctggttaatttggaacggcacagctaaagagcga
aattttggggagatgaagttcaagcagtgcccgacagagaacatggccagagaacacttc
aagaaacacggcacagaacactactgggatctagctctcagcaagagtgtgttggacaac
ccagatgactga
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