Cyclopterus lumpus (lumpfish): 117745671
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Entry
117745671 CDS
T09199
Symbol
cdcp1a
Name
(RefSeq) CUB domain-containing protein 1a
KO
K06732
CUB domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117745671 (cdcp1a)
CD molecules [BR:
clum04090
]
Proteins
117745671 (cdcp1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
CUB
TMEM154
Orf78
DUF443
Cadherin_C_2
Sigma_reg_N
DUF6377
Motif
Other DBs
NCBI-GeneID:
117745671
NCBI-ProteinID:
XP_034410046
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Position
16:7274855..7281135
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AA seq
813 aa
AA seq
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MWSSGVPLQLLLLTCVASTVSGVQKLTLTTDRGTFLNISSSQVKGCKVCTGAGSSRRCSP
SLVIKDGPPVSMEFECSRPQDVFSVEIVRRIECTTKLCNGHIILAASDSLPLLDFNRKFT
WNLKASAPKALKIDFSPSGMRQINPSERCSDKHSYTLQAFQTTGSVTVGKYCRTGPVGSA
QVPNQGSFSLDVPAGQKLPNGLFDVSVGEEIKTLAKITLTLPNGTSSSELLSPNYPDSFP
DDDVMEWYFQVPENQKTAIQFLNLTQPHCLKKDTAMEYHSTGRGAMVRSLKDPQPGDMHG
KFSLTLRNCEMDRRSVGSPGLSLNLRVSSSRARSTVSCKVDMSQMEGLTLHIERVRPASD
CQMKMNSVPKEKITVASESVLTFHDCFPEDVLVTAMRVVECRRLKDCPKTPARLLVPALP
TCLPGPLSSVTWTLRPPQHGTVELTSPTEPLKQSLPGQRCNDSILIKVAEDDGTTIGHFC
PRGAIQKVQIHTNMSVTVSGVEGKALRTPFKHVLNALFKGAISERYIFTVSPKRDTPVLL
ATPGWPVGMNSYATVSWIVSLPPKMDAHLMFANLSQPKCSNRHTNIKVQRVGSPEEEYSR
REDEEAESELTVSGNFYLNMSNCMPERGDFSVITEVTLQKSKNLLLTILSVVAALLVLFV
IVLVVVCVVIRKKKKKLNHQVSIYNPNGTGFLPGHNGFPKTREDNESHVYASIEDTLVYT
DLLRKGAEMGVYGEFDTHQPFPGHTDSQKPLVCRDAITDAMPVGTYEQFQAPPLPVRPLS
HNQPLVDNVLYQIEGEEEHSLNLGPRLEPEGGN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcctcgggagtccccctccagcttttacttctcacgtgcgtcgcctccaccgtg
tccggggtccagaagctgaccctcaccactgacagaggcaccttcctcaacatcagcagt
agtcaggtcaagggttgcaaagtgtgcacgggggcaggaagctcacgacgatgtagtcca
tccctcgtgataaaagacggccctccggtctcaatggagttcgagtgctcccgacctcaa
gatgtgttcagcgtggaaattgtgcgacgtatagaatgtaccacaaagttgtgcaatggc
cacatcatcctggcggcctccgactcgcttcctttgctggattttaaccgcaagttcacc
tggaacctgaaggcatctgcgccgaaagcgttgaaaatagatttcagcccctcgggtatg
agacagatcaatccatctgagagatgttcagacaaacacagctacaccctgcaggccttc
cagactacagggagcgtgaccgtggggaaatactgcagaacgggacccgtcggtagtgct
caggtacccaaccaagggagcttttctctggacgtcccagcaggccagaaactgccaaat
ggcctgtttgacgtgtccgtcggggaggaaatcaaaactcttgccaaaattacactgacg
ttaccaaacgggacctcgtcctcagagttgctctctccgaactacccggacagtttccct
gacgacgacgtgatggagtggtactttcaggtcccggaaaatcaaaagacagccattcag
ttcttgaatctcacacagccgcattgtctgaagaaggataccgcgatggagtaccacagc
accggtagaggggcgatggtgcggagtctgaaagacccgcagccgggagacatgcatgga
aagttctccttgacgctgaggaactgcgagatggacagaaggagtgtgggttctcctggg
ctgtcgctaaacctcagggtgtcttcttcaagagcaagatcaacagtgtcgtgtaaagtg
gacatgagccaaatggagggcctcactcttcacatcgagagggtgagaccggcctccgac
tgccagatgaagatgaactctgtgcccaaggagaagatcaccgtcgcatcagagagcgtg
ctgactttccacgactgctttcctgaagacgtacttgtcaccgccatgagagtcgtagag
tgtcgtcgtctcaaagactgcccgaagacgccggcccgcctgttggtgcccgcgctgccg
acctgcctccccggccctctgagcagcgtgacctggactctccgtcctccccagcacggc
acagtggagttgacctctcccaccgagcccctcaagcagtccctccctgggcagcggtgc
aacgacagcatccttatcaaagtggccgaagacgacggcactaccatcggacacttctgc
ccccggggagccatacagaaggtccaaatccacaccaacatgtccgtcacggtgtccggc
gtggagggcaaagcactacggacgcctttcaagcatgtgctgaatgccctttttaaaggg
gcgatatccgaaagatacatattcacggtatctccaaagagagacactcctgtcctactg
gctactccgggttggccagtaggaatgaattcctacgccaccgtctcctggatcgtctcc
ctgcccccgaagatggacgcccacctgatgtttgccaacctcagccagcccaagtgcagc
aaccgtcacactaacatcaaggtgcagagggtcggctccccggaggaggagtacagccgc
agggaagacgaggaggccgagagtgagctcaccgtctcggggaacttctacctgaacatg
tccaactgtatgccggaaagaggggacttcagcgtcatcaccgaggtcaccctgcagaag
agcaagaaccttctgctgaccatcctgagtgtggtggctgctctgttggtcctctttgtc
atcgtgctggtggttgtctgtgtggtgattaggaagaagaagaagaagctgaatcatcaa
gtgtccatctacaatccaaacggcaccggcttcctgccgggacacaacggcttcccaaaa
actcgcgaggacaacgagtcccatgtgtacgcctccattgaggacacactggtctacacg
gacctgctgaggaagggggccgagatgggagtctatggagagtttgacacacaccagccc
ttcccggggcacaccgattcccagaagcccctggtctgtagagacgccataacagacgcc
atgccagtcgggacttacgagcagtttcaggctcctccccttcccgtcaggccgctgagc
cacaaccaacccttggtggacaatgtgctttaccagattgaaggtgaagaggaacactct
ctgaatctggggccgcggctggagccagagggtgggaactga
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