Cyclopterus lumpus (lumpfish): 117745689
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Entry
117745689 CDS
T09199
Symbol
sntb1
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117745689 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117745689
NCBI-ProteinID:
XP_034410078
Ensembl:
ENSCLMG00005007258
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All DBs
Position
16:complement(6953729..6985721)
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AA seq
555 aa
AA seq
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MAVVITTGVSGASGVPKSGFLEVSVRERWHKVLINLNEEALTLSCEEGCVNDNVNDCVDF
NGVTNGSYLDNNNANSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVTKQEVGGLGISIK
GGKENKMPILISKIFKGLAADQTQALYVGDAILSVNSVNLRDATHDEAVQALKRAGKEVT
LEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSPTIISSSSSFSTFDPPSSPTQPSL
SLQGDRRCIPLKMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHS
VTSKLAQRALAEVIQSTARTGVAGSKEIRHLGWLAAKTESEKQSWKPVLMVVTVKDLLLY
ESLPRGPEAWQSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAE
TTKDLSLWTRHIVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPKLGDGEN
VEERGAHTATRPRVLLSYPYEKLKMSSDDGVRMLFLDFGGKEGEIQLDLHSCPKPIVFIL
HSFLSAKIYRLGLVA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcataacgacgggagtttcaggtgcctccggagtaccaaaaagtggattt
cttgaggtttcggtgcgggagcgatggcacaaagttttgatcaacttaaacgaggaagcg
ctcacgttaagctgcgaggagggctgcgttaacgacaacgtgaacgactgtgtcgacttc
aacggggttaccaacggatcctaccttgataacaataacgccaactccaacaacggcccc
caaactgtgcgcactgcgttcacggacctcccggagcgagtgccggaggcgatcgccaac
agaaagcggtgcgttaaggtgaccaagcaggaggtcggaggactcgggatcagcatcaaa
ggtgggaaggagaataaaatgcccatcctcatcagtaagatattcaagggactcgcagcg
gaccagacccaggctctgtatgtcggggacgccatcctgtccgtgaacagcgtgaacctg
cgggacgcgacccacgacgaggctgtgcaagcgctgaaacgggccgggaaagaggtgaca
ctggaagtgaagtacatgcgtgaggccacaccatatgtcaaaaagggctcccctgtgtca
gagatcggctgggaaaccccacctcctgagtctcctcgcctcggcagccctaccattatc
tcctcttcctcctccttttccacttttgaccctccgagctctcctacgcagccctcgctg
tccctgcagggcgacaggaggtgcataccactcaagatgtgctgtgtaacccgagccatg
accacaccagaccctgagaacagacaactggagctgcactcccctgacgccaggcacacc
gtggtgctgcggtgcccagaccaaccatctgccctgtcctggttctctgccatgcactcg
gtcacatccaaactggcacagcgggcgctggcagaggtcatccagagcacagccaggacg
ggggtagctggcagcaaagagatacgacacctgggatggctggctgcgaagacagagagt
gagaagcaaagctggaagcctgtgctgatggtggtgacagtaaaagacctgctgctgtat
gagagtctaccgcgaggcccggaggcctggcagagccctgcacacacgtacccactttta
gcaacccgtctggtccactctggccccgaccgggggtcgccacattcgggcacagagctg
ttctttgccactcggaccggcacacgactcggcatcgagactcacctgttccgggcagag
accaccaaggatctgtctctgtggaccaggcacatagtcaacgggtgtcacgcctcagcc
gagatgatcaaagaagtcacgacgagttgtctataccagagtcaggagtgtcggctggtg
attcactacgaacagggcttctctgtgctggctgaccccaaactgggagacggggaaaat
gtggaggagagaggagctcacacagcgaccaggccgcgggtgctcctgtcctacccctac
gaaaagctaaagatgtcctcggatgacggcgtgcgcatgctcttccttgactttggagga
aaggagggggagattcaactggacctccactcgtgtccgaagccgatcgtcttcatcctc
cactccttcctctctgctaagatctaccgtctgggtctggtggcctga
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