Cyclopterus lumpus (lumpfish): 117745714
Help
Entry
117745714 CDS
T09199
Symbol
smpd5
Name
(RefSeq) sphingomyelin phosphodiesterase 5 isoform X1
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00600
Sphingolipid metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117745714 (smpd5)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117745714 (smpd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117745714
NCBI-ProteinID:
XP_034410114
Ensembl:
ENSCLMG00005010215
UniProt:
A0A8C2XLC1
LinkDB
All DBs
Position
16:complement(9109226..9113290)
Genome browser
AA seq
582 aa
AA seq
DB search
MALQVSPFPNGFVAGIHAVGWAFILPCFWFLDRLIALCKSTTPEQTQRLEKGCYLHPLKV
FFGSIIFFILFLATAPLGFLGFMLWAPLQACRRPFYYHRETPSSPEETHRGFELVGKASF
GFATANLCLLPDSLARFNNLGHTQRRAAVIGQHIVQGVCRPHIRIFIDSPSSCGTLSPSN
SILPTVNSSSYGATDKHAQPPVSHHSDSAGVHVSIPKSNSHVVCVPCDDTEEPSTDSPSL
LSNMNHHSNQQGRAGHRSAPRALLSQGLRQQDDVPWEVSSLFPANVDILCLEEVFDKRAA
QKLTQALKPVFGHILYDIGVYACQPPCRCSSFKFFNSGLFLASRFLVLEAQYHCFPNSRG
EDALAAKGLLSAKVLIGQNQKQKKVVGYFNCTHLHAPEGEGEIRCEQLNLVTKWIGDFQA
ANKLPDEDVAFDVLCGDFNFDNCSPDDTLEQNHCLFEEYRDPCRAGPGKEKPWVIGTLLE
QPTLYEDDINTPENLQRTLETEDLRKRYISPPVPGEDCPLVYPETGQPWIGRRIDYILYR
ENSISKHCRTEIEEVTFITQLAGLTDHIPVGLRLNVIMDSAE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcaggtatctccatttcctaatgggtttgttgcaggcatccatgctgtggga
tgggcattcatcttgccttgcttctggtttcttgatcgtctcattgctttgtgcaagtcc
accaccccggagcaaacccagcgactagagaagggatgctacctccaccccctcaaggtc
ttctttggctccattatcttctttattctttttctcgcaacagcccctttgggcttcctg
ggatttatgctctgggcacctcttcaggcttgccgcaggcccttttactaccacagagag
acaccatcctcaccagaggagacgcaccggggctttgagttggtaggaaaggcctcattt
ggatttgccacagccaacctatgtctgttgcctgacagcctggctcgtttcaacaacctg
gggcacacccagcgcagagcggctgtgattggtcagcacattgtgcagggtgtgtgtcga
ccccatatccgcatctttattgactcccccagcagctgtggaactctcagcccctccaac
agcattcttcccaccgttaactcatcttcatatggggctactgataaacatgcacagccc
ccagtaagtcatcattctgattcagctggagtgcatgtttcaatcccaaagtccaatagt
cacgtcgtctgtgtgccctgtgatgacacagaggagccctcgactgactccccttctctc
ctttcaaatatgaatcaccactccaaccagcagggccgagcaggtcaccggagtgctccc
cgagctttgctctcgcagggtctccgccaacaggacgatgtaccctgggaagtgtcgtca
ttgtttccagccaatgtggacatactgtgtctagaagaggtgtttgataagagggcagcc
cagaagctcacccaagcactaaaacccgtgtttggacacatactgtatgacattggtgtg
tatgcctgccagccaccatgcaggtgttcctctttcaagttcttcaacagtggcctgttc
ttagccagccggttccttgtgcttgaggcccagtaccactgctttcccaacagccgtggg
gaagacgcactagctgccaagggcctcctttctgctaaggtgctaattgggcagaatcag
aaacagaagaaagtggttggctatttcaactgcacacatcttcatgcaccagagggagaa
ggggaaattcgctgtgagcagttaaaccttgttaccaagtggattggggattttcaagct
gccaacaaactccccgacgaggatgttgcttttgatgtgctctgtggagatttcaacttt
gacaactgctcacctgatgacaccctggaacaaaaccactgtctgtttgaggaatataga
gatccttgtagggcaggtcctggaaaagagaagccctgggtcattggtactctgctggag
cagcccacattgtatgaagatgacataaacaccccagaaaatctacaaagaactttggag
actgaggatctgagaaagcggtatatctcccctcctgttcctggagaagactgccccttg
gtttaccctgagactggccagccgtggatcggacgtcggatcgactacatcttgtaccgc
gaaaactccatttcaaagcactgccgaacagaaattgaagaggttaccttcataacccag
ctggctggccttacggaccatattcctgtgggcttgagattgaatgttattatggactct
gctgaataa
DBGET
integrated database retrieval system
