Cyclopterus lumpus (lumpfish): 117745832
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Entry
117745832 CDS
T09199
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00900
Terpenoid backbone biosynthesis
clum01100
Metabolic pathways
Module
clum_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117745832 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
clum01006
]
117745832 (fdps)
Enzymes [BR:
clum01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117745832 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117745832 (fdps)
Prenyltransferases [BR:
clum01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117745832 (fdps)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
117745832
NCBI-ProteinID:
XP_034410272
Ensembl:
ENSCLMG00005002034
UniProt:
A0A8C2WP47
LinkDB
All DBs
Position
16
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AA seq
359 aa
AA seq
DB search
MGDAVCNGTHGNKQTLLSDPQLFEAQFDELVTELSERDLADPALADALTRFREVLVYNSP
GGKRNRGLSVIASLRDLLPPTRLTQDTVQRALLVGWCIELLQAFFLVADDIMDGSVTRRG
RSCWYKKDGIGLDAINDSFLLEAAIYRLLRRHCRDQPYYVHLLELFTETSFQTELGQALD
LMTSTPGQIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYIAGIESEEEHNNAKHILLE
MGEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCSWLVVTALETMTPEQRAELKACYGRHD
DASIEKVKALYCTLQMPTLYHKYEEDSYQRLQKLIACHAQNLPHSIFLNFAKKIYKRNK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgccgtctgcaacgggacgcacggcaacaaacagacgctgctgtccgaccct
cagctgtttgaagcccagttcgacgagctggtgacggagctttcagagagggacctcgct
gaccccgcgctggctgatgctctgaccaggtttagagaggtgttggtgtacaattcccct
ggaggcaagaggaaccgaggactgtctgtgatcgcttcgctgcgggaccttctccctccc
actcggctcacacaggacaccgtgcagcgggctctgttggtcggctggtgcattgagttg
cttcaggcattttttctggtggcagatgatatcatggatggatctgtgactcggagagga
cggtcctgctggtacaagaaggatggaatcggtctggatgccatcaatgattcatttctc
ttagaggcggcaatctacagactgcttcgcagacattgcagggatcagccgtactacgtc
cacctactggagctatttacagagacatctttccagaccgagctcggccaagctctggac
ctcatgacttctacccccggtcagattgacctcaacagattcacaatggagaggtataaa
gctattgtaaagtacaagactgcgttttactctttttacctaccagtggcagctgcgatg
tatattgcaggaattgagagtgaagaggaacacaataatgccaaacacatcctacttgag
atgggagagttttttcaaatacaggatgactacttggactgctacggagatcctgctgtg
acaggaaagattggcacagacatccaggataacaaatgcagctggctggtggtgacggcg
ctggaaaccatgactcctgaacaaagagcagagctgaaggcatgctatgggcgccatgac
gatgcctctatagaaaaggtcaaagcattgtactgcaccctgcaaatgccaacgttgtac
cacaaatatgaggaagacagctaccagcggttacagaaactcattgcttgtcacgctcaa
aatcttcctcactcaatcttcctcaactttgccaagaaaatctacaagaggaacaagtga
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