Cyclopterus lumpus (lumpfish): 117745834
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Entry
117745834 CDS
T09199
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117745834
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117745834
NCBI-ProteinID:
XP_034410276
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Position
16:9417724..9428381
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AA seq
835 aa
AA seq
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MKSNQERNNGCLPPKKREILALEQRPMVVATAAPPAAVVTDSPHTENLAWLASVASERCK
SRDAESPRCPISSTSSYSPSTSIPSSTTPLSAVPLASLPAVYPTALHQQAGTIQFAQLGP
NVQFISSGPYAGYISSHIISANAGSALNSSTMAQRPQLDGYTTALISPNTKGEQQFHIGL
SPTEMTPVSLPNSPQVTSQYIHLDSRTPLAVSGNTITSPTAHLQLHPHTAVLPQTLTLAP
SQLLVQYADGSVGKKPEGHAKGVLNGEFEVVKQTKTPSHHVNHQHVQSYETRHILLPADY
GQNPSGLQTSLVLLAQPNHGAERETGLNKFSFVQTEKGGICLGKPVSRSSSFTSLSSSDL
VKSVAPHTVIQTTLAHEELPASLYSTTQPPIIGYITSANQHAVSYHAALPQHLVIPSGQS
LLIPVSGTNNGTEIEVSRAVSTLTATTTPHISTAMPHAYLATALSKCEALGPDGNQPPPA
VAQAPAMPVLPSNPAPAMVAAPSPTPAPVPSPAPVSIQSSHSISSPSSPVALPPFFMRGS
IIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDSGQSPNAVVIQFSVGELKA
QVCVEVLLEYPFFVFGQGWSSCCPDRTTQLFELSCAKLCVGDVCVSLTLRSLRTTSVTDS
QASGTKLKTGHFSDSCHNVDPPVVKMSPSPNAAGRNSGPPMKASSADRLERDQVIGPGSG
QGLELLSGLGLVPGPGEGIYGAGAMLAVSGTVEVRQESVKTDTPALTKIQCSDPERPNVR
KRRWSAPERDQTERAEEEPPLTLPKPSFIPQEVKISIEGHSRIGSGRCLNKRIDC
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagcgaaataatggatgtctgcctcctaagaagagggagatcctt
gctctggagcagaggccaatggtcgtagccacagcagcacctccagctgcagtggttact
gatagtccacacacagagaacctagcatggctggcaagtgtagccagcgaacgctgcaaa
tccagggacgcagaaagcccaagatgtcccatctcctccacttcctcctactctccctcc
acctctatcccttcctcgaccactcctctgtctgcggtgcccctggcttctctccctgca
gtttaccccacagcccttcaccagcaggccgggactatccagtttgctcagctgggaccc
aacgttcagttcatcagctctgggccctacgctggctacatctcctctcacatcatctcc
gccaatgctggctctgcacttaacagctctaccatggcacagcgtccccagctggatggc
tacaccactgccctcatctcccccaacaccaaaggggagcagcagtttcacataggcctc
tctcccacagaaatgactcctgtgtcgcttcctaactctccccaagtcaccagccagtac
attcatctggacagcagaacacctctggctgtaagcggaaacaccatcacttcacccaca
gcccacctccagctccaccctcacacagctgtcctccctcaaacgctaaccctggctccc
tcccaacttttggtacagtatgcagatggttcagttggaaagaaaccagaggggcatgct
aagggtgtactgaatggggaatttgaggtggtcaaacagactaaaactcccagtcatcat
gtgaaccatcagcatgtccagagctatgagaccagacatatcctcctgcctgcagactac
ggccaaaacccttcaggactccagacctccttggtgctgttggcccagcccaaccatgga
gctgaacgggaaactggcttaaataagttctcatttgtccagactgagaaaggaggcatc
tgtttggggaaaccagtgtcgagatcctcctccttcacctccctctcttcctcagatttg
gttaagtctgttgctcctcatacagtcatccagaccactctagcccacgaggagctgcca
gccagtctgtattccaccacacagccgcccatcattggctacatcaccagtgcaaatcag
catgctgtcagctaccatgcggcgctgcctcagcacctggttatccccagtggtcagtcc
ctcctcattccagtcagcggcaccaataacggcaccgaaattgaggtgagtcgtgctgtc
agcaccctgactgctacgactacccctcatatatccaccgccatgccgcatgcctatctg
gccacggccctgtccaagtgtgaggcgcttgggccagatggaaatcagccaccccctgct
gtcgctcaggcaccagcaatgccagtcctgccctcgaacccggctccggccatggtggca
gctccctccccaactcctgctcctgtccccagtcccgcccctgtttccatccaatcctcc
cactccatttcctctccttcttcccctgtggcacttcctccgttcttcatgcgaggatcc
atcatccagctggccgatggggagctgaaacgcgtggaggacctgaagacggaggacttc
attcagagcgctgagattagtagtgagctgaagattgattccagcactgttgagcgtatt
gacagtggacagagtcctaatgccgttgtcatacagttctcagtgggagagctcaaagcc
caggtgtgcgtggaggtgctgctggagtatcccttctttgtatttggccagggctggtcc
tcctgctgcccagaccggaccacccagctgtttgagctctcctgtgctaagctgtgtgtg
ggtgatgtatgcgtgtcgctgaccctccgcagcttgaggaccacttcagtaacagacagc
caggcttcggggaccaagctgaagacgggtcacttctctgactcttgtcacaatgtggat
ccccccgtcgtgaaaatgagtcctagtccaaatgctgcaggcagaaatagcggccccccc
atgaaggcttccagtgcagacaggctggagagggaccaggttattggaccaggatcagga
caaggactagaactactatcgggattgggactagttccaggaccaggggaggggatctat
ggagctggagcaatgctggcagtctctgggactgtagaagtgagacaggaatcagtgaaa
acagacacgcctgcccttaccaaaatacaatgcagtgatccagagagacccaacgttcgc
aagagacgctggtcagctccagagcgcgaccagactgaacgagctgaggaggagcctcct
ctgactctgcccaaaccttccttcatccctcaggaggtaaaaatcagcatagagggccac
tccaggattgggagtggaaggtgcttgaataaaagaatagactgttga
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