Cyclopterus lumpus (lumpfish): 117745889
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Entry
117745889 CDS
T09199
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117745889
NCBI-ProteinID:
XP_034410379
Ensembl:
ENSCLMG00005007282
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Position
16:2878854..2932113
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AA seq
1091 aa
AA seq
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MRPTPGSPPPVLPAVLALALAALWPRLSSGATPFPQDLEPISTVGRESSYLYPSFQGLMS
DNDTVRLGLDFQRMLRINRMLYVAARDHVFAINLATSAEQIIPQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIDYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINRRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFSGKFKEQRNS
ETAWTPVPEDQVPKPRPGCCAGEGSAAAYKSSTTFPDDTLTFIKSYPLMDESVPSVNDRP
YFTRTTSRFKLTQIAVDTSAGPFKNYTVVFLGSDNGRVLKILASTEGANASFSTQLLEDV
DVYNPDKCNVRGEDRRVLGLELDRDHHAVFVAFSGCVIRVPLSRCSDYGTCKKSCLSSRD
PYCIWLKSGSCATVSPGFKGGFEQDVENGYHQHAETCHDVLATTRKQNTALDLAYGKTTP
TSASTTYHGPAFPKEAGDPERGTGPDGPPPVGEQESPDSEPISVEMEGVRRPPELEKTNH
SVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSRDDKLEVSSPKIYNSFFANSKEHHPPRRNGHHAMTMGDLVHPHHHHHHLHHS
SELSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNTGSRPSSALLHQQVFPY
SHGLSNGQPLVGGHLHPEERKIHNVERVLSQQPYPGYSQKVMEVTSLDELLKHIHEASSS
KNTQLMSPSGLMACGGGHLAFANRIQPQIPETESAPYYSSSTLPRDSLTRRMDVPPDIPL
HHQSTLERRHSSQRHSLIAAATKMPNGVAGGGGGGGMIPRQHSFSQRNGGPHQPPPLLAR
MNSTGSACEVHYPLIPNGYLTRQHSYNEEQHEVQHRGAIVRRASSLKPDVPPKPLFIPAT
SPVNQQGKFNY
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgacgcccggctcgcctccacccgtcctgccggccgtcctggcgctcgccttg
gccgccctctggcctcggctgtcctcgggagccacgccgttcccccaggacctggagcca
atcagcaccgtgggcagagagtcctcctacctctaccccagcttccagggcctcatgtcg
gacaacgacaccgtgcgcctgggcctggacttccagcggatgctgaggatcaaccggatg
ctctacgtcgctgcccgggaccatgtgtttgccatcaatctcgccacttcggccgagcag
ataatcccacagcagaagctgacgtggaagacgaaggatgtggagaagtgcaccgtgaga
gggaagaacagcgacgaatgttacaactacatcaaagtgctggtgccgcgcaacgacgag
acgctcttcgcctgcggcaccaacgccttcaaccccacctgccgcaactacaagatgtcc
acgctggagcaggaaggggaggaggtggtgggacaggcccgctgtcccttcgagtcccgc
cagtccaacgtgggcctgttcgcaggtggcgatttctactcggccaccatgacggacttc
ttggcgagcgacgcggtgatttacagaagtctgggagagagcagccccgtgctgcgcacc
gtgaagtacgactccaagtggctgagagagccccatttcctccacgccatcgactacggg
aactacgtgtacttcttcttcagcgagatcgcggtggagtacaccactctcggcaaggtg
gttttctccagagtcgcacgcgtctgcaagaacgacaacggcggctcgccgagggtgctg
gagcgctactggacgtcgttcctcaaagcgcggctcaactgctcggtgccgggcgactcc
ttcttctacttcgacgtcctgcagtcgctcaccaacgtgctgcagatcaaccgccgaccg
gccgtgctcggcgtcttcaccacgcaggccaacagcatcacgggctcggccgtctgcgcc
ttctacatggacgacatcgagaaggccttcagcggcaagttcaaagagcagaggaacagc
gagacggcgtggacgccggttccagaggaccaggtccccaaaccgaggccgggatgctgc
gccggcgagggctcggcggccgcctacaagtcgtccaccaccttccccgacgacaccctg
accttcatcaagtcctacccgctcatggacgagtccgtgccctcggtcaacgacaggccc
tacttcacccggaccaccagcagattcaagttgacccagatagcggtggacacgtcggcg
gggccgttcaagaactacaccgtggtgttcctgggctcggacaacgggcgcgtgctgaag
atcctggccagcaccgagggagccaacgcgtccttcagcacccaactcctggaggacgtg
gacgtctacaaccccgacaagtgtaacgtgcggggggaggacaggagggtgctgggtctg
gagttggaccgggaccaccacgccgtgttcgtggcgttctccggctgcgtgatccgcgtg
ccgctgagccgctgctccgactacggcacctgcaagaaaagctgtctgtcttcgcgggac
ccttactgcatctggctcaagtctggcagctgtgcaacagtctcacccggcttcaaaggc
ggctttgaacaagatgtggagaacggttaccatcagcacgctgaaacctgccatgacgtc
ctggcgacgactcgcaagcaaaacacggcgctggatttggcgtacgggaagaccacaccc
acaagcgccagcacaacctatcatgggccggcgttcccaaaggaggcaggtgaccctgaa
agaggtacaggtcctgatggccctccccccgtaggggagcaagagtcacctgactcggag
ccaatcagtgtggagatggagggtgtgaggcgaccgccggagctggagaagaccaatcac
agtgtccattataccctcctgatcgcttgtgttttggtggcctttgtcctcggcgccttc
ctctccggcttcctggtctcctgctactgtaaccacaccggccacaagaccaagaagctg
tcgaaggatccagaggcgccgatcccgcacgccctgtccctccgcagcctggccaagctc
aacggcctcctggacagccagagcagggacgacaagctggaggtgtcctctcctaagatc
tacaactctttcttcgccaacagtaaggagcatcacccgccgaggagaaacggccatcac
gccatgacaatgggagacctggtccacccgcaccaccaccaccaccacctccaccattcc
tccgagctgtctggtctgcctacgccggactcaaccccagaactgcccatcaagagcatg
aaagccttcaagaaccagtgggagaagaaccagaactgcaacaatgccaaggaaccaaag
tcccacaacactggctccaggcccagctccgccctgcttcaccagcaggtcttcccgtac
tcccatggcctgtccaatgggcagccattagtcggaggccacctccatccagaggaacgc
aaaatccataatgttgaacgtgtgctttctcagcaaccttaccctggttactcccagaag
gtgatggaggtcacctcactggatgagctcctgaagcacatccacgaggcaagcagcagc
aagaacacccagttgatgagcccgtcaggtctgatggcttgcggcggcggccatcttgcg
ttcgccaaccgcatccaacctcagattcctgagactgaatcggccccttactacagctcg
tccactttacctcgagacagcctcacccgacggatggatgttcctccggacattcccctg
caccaccagtccaccctggagaggaggcactcctcccagaggcactcgctaatcgccgca
gccaccaagatgcccaacggcgtggcaggcggaggcggcggaggcggaatgatacctcgg
cagcacagcttcagccaacggaatggcgggccccaccagccgcctcccctcctggcacgg
atgaactcgacgggcagcgcctgcgaggtgcactaccccctcatccccaacgggtacctg
acacgccagcacagctacaacgaagagcagcacgaggtccaacacaggggcgcgatcgtt
cgccgggcctcctccctcaaacccgacgtccctccaaagcccctgttcataccggccacg
tcccccgtcaaccaacagggaaagttcaactactga
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