Cyclopterus lumpus (lumpfish): 117745934 Help Entry 117745934         CDS       T09199                                  Symbol rc3h1b Name (RefSeq) roquin-1b isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:clum03000]     117745934 (rc3h1b)    04121 Ubiquitin system [BR:clum04121]     117745934 (rc3h1b) Transcription factors [BR:clum03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     117745934 (rc3h1b) Ubiquitin system [BR:clum04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     117745934 (rc3h1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 Prok-RING_4 zf-CCCH_UNK zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  117745934 NCBI-ProteinID:  XP_034410451 Ensembl:  ENSCLMG00005016159 LinkDB All DBs Position 17:8483250..8500636 Genome browser AA seq 1135 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD IEQLPVNTALLQLVGGQVPKVQPVALITSPEDSQHYEEARQCVEELALYLKPLSNTRGVG LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSGGLMSDEGLPLDVAVTRKPS PLTNGSGGPSLPQLIARGTDTVPYELLRKPMKMDGGSPSAPGSPPDGMDPALPKPGMPLP PHVMAHPRMPVDHLSGVKHMPVVARGSPVYPQAPLPEMCYDTRPPPSASQYEPPQYPTGY PYQQPPQYVPRDYMRNPPPPSESGPPYQDPYSGYGPPERSYQAPHSGPPFSYPHPPHHDR GRHGNYTGPPPPPQPYPSQRDGLVRMSPAPLDMPPPSAGQANSLYHQEPSSRDRYPPDGY YTPGAQPPPMRAYVRGPSYSSSQPSLDYLHRRRQELLSQLEERKVISPPPFAASPTLPHP FPSDYPPEYGEENSKTMVNRREPDYAGQYSPWSCETIGSYIGTKDAKPKDVMVPGTMDMM NAEAKGLREPSLEAPRRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMA STPQNPSSKHMAMPAEYTYGSHGGWGGASYPSHQTASSSQGHFSERLPMAAPDREQLKIE LQQVNQQINQQTQMRSMEAANNSLLLQREANALAGQPVQPGQGQATAAQQQPKWPAVGAS TTAVSSEQLSLELHQVEREIGKRTREMALENQVTHDVQQYKIKPAENGQPEHKTQLEEIS LALGEVSNGSNSLQDSAVGGSMLSLTNKTSALGLCSDPGATGSEMQKNGVVHSCS NT seq 3408 nt NT seq  +upstreamnt  +downstreamnt atgccagtgcaagcaccacaatggacagagttcctgctgtgcccgatctgcacacagaca tttgaggagactgttcgccggcccatcagcttgggctgtggacacactgtctgcaagatg tgcctgaacaagttgcaccgtaaggcctgtccctttgaccagacagccatcagcacagac attgagcagctacctgtgaacactgccctgttgcagctggtggggggccaggttcctaag gttcagccagttgccttgattaccagtccagaggactcgcagcattatgaggaggccagg cagtgtgtggaggagctggccctctatctcaaacctctcagcaacaccagaggtgtggga ctgagcagcacggcccagagcatgctgagtcgacccatgcagaggaaactggtaactctg gtccactgccagctggtggaagaggagggccgtgttagagccatgagagctgcccgctct ctgggtgagcgaactgtcaccgaactcatcttgcagcaccagaatccacagcagctctcc tccaatctgtgggctgccgtgcgtgcgcgaggatgtcagtttctaggcccagccatgcag gaggaagccctaaagttggtccttcttgctctagaggacggctctgcactgtccaggaag gtgttggttctctttgtagttcagaggcttgagccacgctttccgcaggcctctaagacg agcatcggccatgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaagcgt gatgaagattcatccctgatgcagctgaaagaggaattccgtacttacgaggctttgcgg cgcgagcatgactctcagatagttcagatagccatggagggtgggctgcgcatcgcaccc gaccagtggtcttctctgttatatggagatcaatctcacaagtcacacatgcagtctatc atagataagctgcagaccccagcgtcttttgcccagagtgtccaggagctgacgattgca ttgcagaggaccggagacccagccaacctaaacaggctgcggccccacctggaactactg gccaacatcgatccaagtcctgatgctcctcctcccacatgggagcagcttgagaaaggg ttggtagcagtgaaaacagtggtgcatggtctggtggacttcatccagaaccacagcaag aaaggagctgaccctcaacagcctcctcagcacagcaagtacaagacatacatgtgtcgc gacatgaagcagaagggaggctgtcctcgtggagccagctgcacctttgctcattctcag gaagaactggagaagtatcgtaaaatgaataagcgtttggcagcacgcctccctggctca ggagggctcatgtcagatgagggtcttcctcttgacgtagcagtgacccggaagccttca cctctcaccaatggtagcggtggaccttccttgccccagctaattgcccgtggcactgac acagtcccgtatgaactgttgcgtaaacccatgaagatggatggagggagtcccagtgcc ccaggatcaccacctgatggcatggaccctgcgctgcccaaacctggtatgcctttgcca cctcatgtcatggcccacccaaggatgccagtggaccacctctctggggtgaagcacatg cctgtggtagccagaggttcaccagtctacccccaggcaccgctccctgagatgtgctat gacactcgcccaccaccgtctgcttctcagtacgagccccctcaataccccacagggtac ccttaccaacagccaccgcagtatgtccctcgggattacatgcgtaaccctcctcccccc agtgagtcaggacccccttaccaggacccctattctggctatggccctccagaacgctcc taccaggcccctcactctggtccacctttctcttaccctcaccctccacaccatgaccga ggtcgccacgggaactacactggcccgccacctcctccacagccttacccatcacagagg gatggcctggtcagaatgagtcccgctcctcttgatatgcccccaccatcagcaggacag gctaactccctttaccaccaggagcccagttcccgtgatagataccctccagatggctac tatacaccgggtgcccagcctccacccatgagggcttatgtcagggggccatcatatagt agttcacagcccagccttgactacctgcaccgacgccggcaggagctgttatcacagctg gaggaaaggaaggtcatatcccctccaccattcgctgcctcccccactcttccgcatccc tttcccagcgactaccctccagagtatggcgaggagaactccaaaaccatggtcaatcgc agagagcctgactatgcagggcagtactctccctggtcttgtgaaacgattggctcctac attggtacaaaggatgctaaacccaaagatgttatggttcctggtaccatggacatgatg aatgcagaggctaagggtctgagggaaccatcactggaggctcctcggaggggtgcagaa gtgaaagatgatgaccctatcatcccatttggcccccagcccactgtatcacgcttcggt gccatctcccgcacctcaaagacgggctaccagaccacaggccctgtgcaggctatggcc tccactcctcagaacccaagctctaaacatatggccatgccagcagaatacacatatgga agccatggaggatggggtggagcttcatacccctcacaccagactgcctcctcctctcag ggacacttcagtgagcggctgcctatggcagctccagacagagaacagttaaagattgag ctgcagcaggtcaaccagcagatcaaccaacagacccagatgcgaagcatggaggctgcc aataactctttactgctgcagagggaggccaatgcattggcaggccagcctgtgcagccc ggccagggccaggccacagcggctcaacagcagcccaagtggccagcagtgggagccagt acaacagctgtctccagcgaacagctaagcctggagctccaccaggtggagagagagatt ggcaagaggacccgtgagatggctttggaaaaccaagtaacccatgatgttcagcagtat aagattaaacctgcagagaatggacaaccagagcataagactcagctagaagaaatctcc ctggctcttggcgaggtgtcaaacggctccaacagtctgcaagacagtgcagtgggcggg tccatgctgtcactgaccaataagacgtctgctttgggcttgtgctctgatccaggtgcc actggttcagaaatgcagaagaatggcgttgtccattcctgctcatag

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