Cyclopterus lumpus (lumpfish): 117745943
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Entry
117745943 CDS
T09199
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
KO
K24495
myomesin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117745943 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117745943 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117745943 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
ig
Ig_2
V-set
Pur_ac_phosph_N
C2-set_2
CRLF2-like_D2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117745943
NCBI-ProteinID:
XP_034410469
Ensembl:
ENSCLMG00005016649
LinkDB
All DBs
Position
17:11980811..11999910
Genome browser
AA seq
1508 aa
AA seq
DB search
MSGSLQVTQKLQQQQQQQQQLHYESSCHLSTKSSVKQQSFSTYKTTSRRQKTTVKTVKGQ
AGLKLSPLPKRAKRTYLAMDTDKEVIGYVIPVFRANHEVVRGLMEAQEEEVTEEGINYVA
MRNLFVREAREVVDVKVEKKTRTTHIRESAGRLEFNKTLEEWTEFRKKMNPDSLTHLPEF
IIKPRGQTVWEGKTVKLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTVENSFNMHSLEI
KNCDFIDTAQYHASALNVKGEVSSVATIVIKRFQEGEEAGPLDPKPHGFCAEHGVTFETA
ILDKFEVAFGSEGETMSLGCTVIIYPTVKKYQPEVVWSRNSIPLKQSKWVHTHWSGERAT
LTLVHLNKEDEGLYTLRVNTKSGFDTYSAYVFVRDSDVEVEGVPVAPLDVRCHDANKDYV
VVTWKQPAVEGSSSILGYYIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGRSYAFRVRA
LNQAGVSRPSRVSEAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGIVPGEPSDVVV
TEATKSYVVLAWKPPVQRGHEGVMYYIEKCISGTDTWQRVNTGMPVKSPRFALFDLEESK
SYSFRVRCCNSAGVGEPSVSTGETMVGDKLDLPSVPGNPVAIRNTDTSVVMLWGASKDVK
HLAGYYIEYSVVGTEEWMPCNNKPVKHTRFVCHGLTTGSNCVFRVKAVNAAGYSQSSSHS
DAVVVQAAISVPGKATGVTLLEAVKDYMMLAWTQPASNGGADIRGYFVDYRTVKGDVVGK
WHEMNLKAVTTTSYKAENLKENVFYQFQVRAMNMAGVSKASLSTSALECKEWTLTVAGPP
VGLHVLEVRDTSAVVLWEPPAFDGRTPVNGYYLDVKKASAGEEGWKAAHEKANKMKYMKV
TGLKSGTSYVFRVRAQNLAGVGKPSAVLGPILAQTRPGNNEIYVDVDDDGVISMIFECSE
MKEGSEFVWSKNYQTMTDTSRMTIITEQGRSRAIFNSPSLEDLGTFSCVVTNTDGFSSSY
TLTEEGLKRLLDISHDHKFPVIPFKSEMAMELLEKGRVRFWTQVEKCTSDCQVEYVFNDV
LVTQGKKYTMNFDKTTGIIEMFMDSLEIIDEGTFTFNLVDGKAKGTTSMVLIGDEFRELQ
KKSEFERAEWVRKQGPHFVEYLGFTVTSECNVLLKCKIGNVRPETEITWSKDRIEIAEDD
DDAKKIERKDGDLTFNIGKWVIKQDKPKGKEGKKPTAEDVSPPPRPKISKADAGIYEVFL
RDDRGKDNSLFNLTDTGYQAVMNELFRVIANSSSDLKVISTEHGIILYSEVTYYNEEQRV
GWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYSMDIFDGKDGVKRAFDLTGKA
WEEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPAPEVSWMKND
KELVSGERYTLKFEHGKFASITIAAVTTTDSGKYALLVKNKYGTEAGKFTVSVYNPEEEE
ENKEEKKG
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcattacaagtgacgcagaagctgcagcagcagcagcagcaacagcagcag
cttcactacgagagcagctgtcacctgagcaccaagtcgtctgttaaacaacagtcgttc
tctacatacaagaccaccagccgtcgccagaagaccactgttaagaccgtgaaggggcaa
gcggggcttaaactgagccctctacccaagagagccaaacgcacctacctggcgatggac
acggacaaggaagttatcggctacgtcattcccgtatttagagccaatcatgaggttgtt
cgcggtctgatggaggcccaggaggaggaggttacggaggagggcattaactacgtggcc
atgaggaacctgtttgtcagggaggccagggaggttgtggacgttaaagtggagaagaaa
accagaacaacgcacatcagggaatctgccggacgtctggagtttaacaagacgttggag
gagtggacagagtttcgtaagaagatgaacccagacagcctgacacaccttccagagttc
atcatcaagccccgcgggcagaccgtctgggagggcaagactgtcaagctgcactgcact
gtggctggatggcctaaacccaggattgcctggtacaaaaacaatgtgctcattgatgcc
aaggcccaccctgagaagtacacagtcgagaacagtttcaacatgcactccctggagatc
aagaactgtgatttcatcgacactgctcagtatcacgcctccgccctcaatgtgaaaggg
gaagtttcttctgtggctactatcgttatcaaaaggttccaggagggcgaggaagcaggc
ccgctcgatcccaaaccacatggtttctgcgctgagcatggtgtcacctttgaaacagcc
atcctggacaaattcgaagtggcctttggcagtgaaggcgagacgatgagtctgggctgc
actgtcatcatttatcccactgtgaagaaataccagcctgaagtcgtgtggtccagaaac
tccatccccctgaagcagtctaaatgggtgcacacccactggtccggggaacgagccacc
ctcacacttgtccacctcaacaaggaagacgagggcttgtacacactgcgcgtcaacacc
aaatctggctttgatacctactctgcttatgtgtttgtcagagattctgatgtggaggtg
gagggggttcccgtggccccactggatgtgcgctgtcatgatgccaacaaggactatgtg
gtggttacctggaagcagccagcggtggagggaagcagctccatcctgggatactacatc
gacaggtgcgaggtgggcactcaccactgggctcagtgtaatgacgccccagtgaagtac
gcccgcttccccgtcacaggactagtggaggggcgttcttatgccttcagggtgcgggcc
ttgaaccaggccggagtcagccgtccatcccgtgtgtctgaggccgtggttgccatggat
ccctccgacagagcccgcctcagagctggcccctcagctccttggactgggatgatcaag
ttcacagaggaggatcccactgtgggaattgtccccggagaaccttctgacgttgtggtt
actgaggccaccaagagctacgtggtgctcgcctggaagcctccagtccagagaggtcat
gaaggagtcatgtattacattgagaagtgtatctcagggacagacacctggcagagggtg
aacactggcatgccagtgaagtctccccgcttcgccctgtttgaccttgaagagagtaaa
tcctacagcttccgcgtgcgctgctgcaactccgctggtgtgggcgagccctctgtatcc
acaggagagaccatggtcggagataaactggacctgccctcagtgccgggcaatccagta
gccatcaggaacaccgacacctcagtggtgatgctgtggggggcctctaaggatgtaaaa
cacctggccggctactatatcgaatatagcgtggtgggaaccgaagagtggatgccttgc
aacaacaaacctgtcaagcacaccaggtttgtgtgccacggcctgactaccgggtcaaac
tgcgtgtttagggtcaaagcagtcaacgctgctggatacagccagagctcctcccattct
gatgccgtggttgtgcaggcggccatctccgtccctggaaaggccactggtgtgacgctg
ctggaggctgtaaaggactacatgatgctggcctggacccagcctgctagcaatggagga
gcagatatcaggggatactttgtggactacaggaccgtgaagggagatgtagttggaaaa
tggcatgaaatgaacctcaaggccgtgactactacctcctataaagctgagaacctgaag
gagaatgtcttctaccagttccaggtgcgcgctatgaacatggcgggtgtgagtaaagcc
tctctgtctacttcggctctggagtgcaaggagtggacccttactgtggcaggtcctcct
gttggtcttcatgtgctggaggtccgtgacacctccgccgtggtcctgtgggagccaccc
gcattcgatggacgcactccagtcaatggctactatttggacgtcaagaaggcctctgcc
ggagaggaaggctggaaggctgctcacgaaaaggccaacaagatgaaatacatgaaggtg
acggggctgaagtcgggtacatcgtacgtcttccgtgtgcgtgctcaaaatcttgctgga
gttggaaagccctcagcagtcttgggtccaatcctggcccagactcgccctggcaacaac
gagatttatgtggacgttgatgatgatggtgtgatctctatgatatttgagtgctccgag
atgaaggagggctctgagtttgtttggtccaagaattatcagactatgacagacacctct
cgcatgactattatcactgaacagggcaggtccagagctatcttcaacagtccctccctg
gaggatctgggaaccttctcctgtgtggtcaccaacactgatggcttctcctccagctac
acactcactgaggagggtctcaagcgtcttctggacatcagccatgaccacaagttccct
gttattcccttcaagagtgaaatggccatggagctgttggagaagggtcgcgtgcgtttc
tggactcaggtggagaaatgcacctcagactgccaagtggagtacgtctttaatgatgtc
ctcgttactcagggaaagaaatacacaatgaacttcgacaagaccaccggcatcattgaa
atgttcatggactctttggagatcatcgatgagggaacgttcacctttaacctggtggat
ggcaaggctaagggtacaaccagtatggtgctcattggagatgagttcagggagcttcaa
aagaaatctgagtttgagagggcagaatgggtcaggaaacaaggtcctcactttgtcgag
taccttgggttcactgttacttcagaatgtaacgtgctgttgaagtgcaagataggaaat
gtcagaccagagactgagatcacctggtctaaggaccgcattgagattgcagaggatgat
gacgacgcaaagaaaatcgagagaaaggacggcgatctgacctttaatatcggaaagtgg
gttattaagcaagacaaaccgaaagggaaagaaggaaaaaagccaaccgcagaggatgtt
tccccaccaccaagacccaaaatctccaaggcagatgcaggtatttatgaggtcttcctg
agggacgacagaggcaaagataacagcctcttcaatctgacggacacaggataccaagct
gtaatgaatgagctgttcagggttattgccaactcctcctctgatctcaaagtcatcagt
actgaacatggcatcatcctgtactccgaggtcacgtattacaacgaggaacagcgtgtt
ggttggctgcacaaagatgctaagattgccgcctcagagagagttaagtctggagtcaca
ggagagcagctttggcttaagatcaatgagcccactgagaaggacaaaggcaaatactcc
atggacatcttcgatggcaaggacggtgtaaagagagcctttgacctgaccggcaaggca
tgggaagaggcatttgaagaattccaaaggctcaaggcggcagccatcgcagagagaaat
cgcgctcgtgttgttggaggcttgccagatgtggttgcgatccaagagggcaagtccctg
aacctgactggcaatgtctggggcgagcctgcgcctgaagtgagctggatgaagaatgac
aaggagctggtatctggcgagcgctacacgctcaaattcgagcacggcaagtttgccagc
atcacaatcgccgccgtcaccacgactgactctggcaagtacgccctcctggtcaagaac
aagtacggcacagaggctggcaagttcactgtcagcgtctacaacccagaggaggaggag
gagaacaaggaggagaagaaaggctaa
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integrated database retrieval system