KEGG   Cyclopterus lumpus (lumpfish): 117745943
Entry
117745943         CDS       T09199                                 
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
  KO
K24495  myomesin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117745943 (myom1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:clum04990]
    117745943 (myom1a)
Domain-containing proteins not elsewhere classified [BR:clum04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   117745943 (myom1a)
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_DSCAM-DSCAML_C ig Ig_2 V-set Pur_ac_phosph_N C2-set_2 CRLF2-like_D2 C2-set_3
Other DBs
NCBI-GeneID: 117745943
NCBI-ProteinID: XP_034410469
Ensembl: ENSCLMG00005016649
LinkDB
Position
17:11980811..11999910
AA seq 1508 aa
MSGSLQVTQKLQQQQQQQQQLHYESSCHLSTKSSVKQQSFSTYKTTSRRQKTTVKTVKGQ
AGLKLSPLPKRAKRTYLAMDTDKEVIGYVIPVFRANHEVVRGLMEAQEEEVTEEGINYVA
MRNLFVREAREVVDVKVEKKTRTTHIRESAGRLEFNKTLEEWTEFRKKMNPDSLTHLPEF
IIKPRGQTVWEGKTVKLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTVENSFNMHSLEI
KNCDFIDTAQYHASALNVKGEVSSVATIVIKRFQEGEEAGPLDPKPHGFCAEHGVTFETA
ILDKFEVAFGSEGETMSLGCTVIIYPTVKKYQPEVVWSRNSIPLKQSKWVHTHWSGERAT
LTLVHLNKEDEGLYTLRVNTKSGFDTYSAYVFVRDSDVEVEGVPVAPLDVRCHDANKDYV
VVTWKQPAVEGSSSILGYYIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGRSYAFRVRA
LNQAGVSRPSRVSEAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGIVPGEPSDVVV
TEATKSYVVLAWKPPVQRGHEGVMYYIEKCISGTDTWQRVNTGMPVKSPRFALFDLEESK
SYSFRVRCCNSAGVGEPSVSTGETMVGDKLDLPSVPGNPVAIRNTDTSVVMLWGASKDVK
HLAGYYIEYSVVGTEEWMPCNNKPVKHTRFVCHGLTTGSNCVFRVKAVNAAGYSQSSSHS
DAVVVQAAISVPGKATGVTLLEAVKDYMMLAWTQPASNGGADIRGYFVDYRTVKGDVVGK
WHEMNLKAVTTTSYKAENLKENVFYQFQVRAMNMAGVSKASLSTSALECKEWTLTVAGPP
VGLHVLEVRDTSAVVLWEPPAFDGRTPVNGYYLDVKKASAGEEGWKAAHEKANKMKYMKV
TGLKSGTSYVFRVRAQNLAGVGKPSAVLGPILAQTRPGNNEIYVDVDDDGVISMIFECSE
MKEGSEFVWSKNYQTMTDTSRMTIITEQGRSRAIFNSPSLEDLGTFSCVVTNTDGFSSSY
TLTEEGLKRLLDISHDHKFPVIPFKSEMAMELLEKGRVRFWTQVEKCTSDCQVEYVFNDV
LVTQGKKYTMNFDKTTGIIEMFMDSLEIIDEGTFTFNLVDGKAKGTTSMVLIGDEFRELQ
KKSEFERAEWVRKQGPHFVEYLGFTVTSECNVLLKCKIGNVRPETEITWSKDRIEIAEDD
DDAKKIERKDGDLTFNIGKWVIKQDKPKGKEGKKPTAEDVSPPPRPKISKADAGIYEVFL
RDDRGKDNSLFNLTDTGYQAVMNELFRVIANSSSDLKVISTEHGIILYSEVTYYNEEQRV
GWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYSMDIFDGKDGVKRAFDLTGKA
WEEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPAPEVSWMKND
KELVSGERYTLKFEHGKFASITIAAVTTTDSGKYALLVKNKYGTEAGKFTVSVYNPEEEE
ENKEEKKG
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgtcaggatcattacaagtgacgcagaagctgcagcagcagcagcagcaacagcagcag
cttcactacgagagcagctgtcacctgagcaccaagtcgtctgttaaacaacagtcgttc
tctacatacaagaccaccagccgtcgccagaagaccactgttaagaccgtgaaggggcaa
gcggggcttaaactgagccctctacccaagagagccaaacgcacctacctggcgatggac
acggacaaggaagttatcggctacgtcattcccgtatttagagccaatcatgaggttgtt
cgcggtctgatggaggcccaggaggaggaggttacggaggagggcattaactacgtggcc
atgaggaacctgtttgtcagggaggccagggaggttgtggacgttaaagtggagaagaaa
accagaacaacgcacatcagggaatctgccggacgtctggagtttaacaagacgttggag
gagtggacagagtttcgtaagaagatgaacccagacagcctgacacaccttccagagttc
atcatcaagccccgcgggcagaccgtctgggagggcaagactgtcaagctgcactgcact
gtggctggatggcctaaacccaggattgcctggtacaaaaacaatgtgctcattgatgcc
aaggcccaccctgagaagtacacagtcgagaacagtttcaacatgcactccctggagatc
aagaactgtgatttcatcgacactgctcagtatcacgcctccgccctcaatgtgaaaggg
gaagtttcttctgtggctactatcgttatcaaaaggttccaggagggcgaggaagcaggc
ccgctcgatcccaaaccacatggtttctgcgctgagcatggtgtcacctttgaaacagcc
atcctggacaaattcgaagtggcctttggcagtgaaggcgagacgatgagtctgggctgc
actgtcatcatttatcccactgtgaagaaataccagcctgaagtcgtgtggtccagaaac
tccatccccctgaagcagtctaaatgggtgcacacccactggtccggggaacgagccacc
ctcacacttgtccacctcaacaaggaagacgagggcttgtacacactgcgcgtcaacacc
aaatctggctttgatacctactctgcttatgtgtttgtcagagattctgatgtggaggtg
gagggggttcccgtggccccactggatgtgcgctgtcatgatgccaacaaggactatgtg
gtggttacctggaagcagccagcggtggagggaagcagctccatcctgggatactacatc
gacaggtgcgaggtgggcactcaccactgggctcagtgtaatgacgccccagtgaagtac
gcccgcttccccgtcacaggactagtggaggggcgttcttatgccttcagggtgcgggcc
ttgaaccaggccggagtcagccgtccatcccgtgtgtctgaggccgtggttgccatggat
ccctccgacagagcccgcctcagagctggcccctcagctccttggactgggatgatcaag
ttcacagaggaggatcccactgtgggaattgtccccggagaaccttctgacgttgtggtt
actgaggccaccaagagctacgtggtgctcgcctggaagcctccagtccagagaggtcat
gaaggagtcatgtattacattgagaagtgtatctcagggacagacacctggcagagggtg
aacactggcatgccagtgaagtctccccgcttcgccctgtttgaccttgaagagagtaaa
tcctacagcttccgcgtgcgctgctgcaactccgctggtgtgggcgagccctctgtatcc
acaggagagaccatggtcggagataaactggacctgccctcagtgccgggcaatccagta
gccatcaggaacaccgacacctcagtggtgatgctgtggggggcctctaaggatgtaaaa
cacctggccggctactatatcgaatatagcgtggtgggaaccgaagagtggatgccttgc
aacaacaaacctgtcaagcacaccaggtttgtgtgccacggcctgactaccgggtcaaac
tgcgtgtttagggtcaaagcagtcaacgctgctggatacagccagagctcctcccattct
gatgccgtggttgtgcaggcggccatctccgtccctggaaaggccactggtgtgacgctg
ctggaggctgtaaaggactacatgatgctggcctggacccagcctgctagcaatggagga
gcagatatcaggggatactttgtggactacaggaccgtgaagggagatgtagttggaaaa
tggcatgaaatgaacctcaaggccgtgactactacctcctataaagctgagaacctgaag
gagaatgtcttctaccagttccaggtgcgcgctatgaacatggcgggtgtgagtaaagcc
tctctgtctacttcggctctggagtgcaaggagtggacccttactgtggcaggtcctcct
gttggtcttcatgtgctggaggtccgtgacacctccgccgtggtcctgtgggagccaccc
gcattcgatggacgcactccagtcaatggctactatttggacgtcaagaaggcctctgcc
ggagaggaaggctggaaggctgctcacgaaaaggccaacaagatgaaatacatgaaggtg
acggggctgaagtcgggtacatcgtacgtcttccgtgtgcgtgctcaaaatcttgctgga
gttggaaagccctcagcagtcttgggtccaatcctggcccagactcgccctggcaacaac
gagatttatgtggacgttgatgatgatggtgtgatctctatgatatttgagtgctccgag
atgaaggagggctctgagtttgtttggtccaagaattatcagactatgacagacacctct
cgcatgactattatcactgaacagggcaggtccagagctatcttcaacagtccctccctg
gaggatctgggaaccttctcctgtgtggtcaccaacactgatggcttctcctccagctac
acactcactgaggagggtctcaagcgtcttctggacatcagccatgaccacaagttccct
gttattcccttcaagagtgaaatggccatggagctgttggagaagggtcgcgtgcgtttc
tggactcaggtggagaaatgcacctcagactgccaagtggagtacgtctttaatgatgtc
ctcgttactcagggaaagaaatacacaatgaacttcgacaagaccaccggcatcattgaa
atgttcatggactctttggagatcatcgatgagggaacgttcacctttaacctggtggat
ggcaaggctaagggtacaaccagtatggtgctcattggagatgagttcagggagcttcaa
aagaaatctgagtttgagagggcagaatgggtcaggaaacaaggtcctcactttgtcgag
taccttgggttcactgttacttcagaatgtaacgtgctgttgaagtgcaagataggaaat
gtcagaccagagactgagatcacctggtctaaggaccgcattgagattgcagaggatgat
gacgacgcaaagaaaatcgagagaaaggacggcgatctgacctttaatatcggaaagtgg
gttattaagcaagacaaaccgaaagggaaagaaggaaaaaagccaaccgcagaggatgtt
tccccaccaccaagacccaaaatctccaaggcagatgcaggtatttatgaggtcttcctg
agggacgacagaggcaaagataacagcctcttcaatctgacggacacaggataccaagct
gtaatgaatgagctgttcagggttattgccaactcctcctctgatctcaaagtcatcagt
actgaacatggcatcatcctgtactccgaggtcacgtattacaacgaggaacagcgtgtt
ggttggctgcacaaagatgctaagattgccgcctcagagagagttaagtctggagtcaca
ggagagcagctttggcttaagatcaatgagcccactgagaaggacaaaggcaaatactcc
atggacatcttcgatggcaaggacggtgtaaagagagcctttgacctgaccggcaaggca
tgggaagaggcatttgaagaattccaaaggctcaaggcggcagccatcgcagagagaaat
cgcgctcgtgttgttggaggcttgccagatgtggttgcgatccaagagggcaagtccctg
aacctgactggcaatgtctggggcgagcctgcgcctgaagtgagctggatgaagaatgac
aaggagctggtatctggcgagcgctacacgctcaaattcgagcacggcaagtttgccagc
atcacaatcgccgccgtcaccacgactgactctggcaagtacgccctcctggtcaagaac
aagtacggcacagaggctggcaagttcactgtcagcgtctacaacccagaggaggaggag
gagaacaaggaggagaagaaaggctaa

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