KEGG   Cyclopterus lumpus (lumpfish): 117745958
Entry
117745958         CDS       T09199                                 
Name
(RefSeq) cullin-3-B-like isoform X1
  KO
K03869  cullin 3
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04120  Ubiquitin mediated proteolysis
clum04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117745958
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    117745958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117745958
   03400 DNA repair and recombination proteins [BR:clum03400]
    117745958
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     117745958
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117745958
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 117745958
NCBI-ProteinID: XP_034410492
Ensembl: ENSCLMG00005005600
LinkDB
Position
17:complement(9168638..9177197)
AA seq 766 aa
MSNLKGGPKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLDGRSVYEEDFEGPFLDMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILEKAMVLFRYM
QEKDVFERYYKQHLGRRLLSNKSVSDDSEKNMISKLKTECGCQFTTKLEGMFRDMTISNT
TMDEFRQHIQTTSASLSGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGGADLNATFYGTIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKCTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHLFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggccccaagaaggacaccaagatgaggatacgagcctttcct
atgacaatggatgagaagtatgtgaacaacatatgggacctcctaaaaaatgccatccaa
gagatccagaggaagaacaacagtgggctcagctttgaggagctgtacaggaacgcctac
actatggtgctccacaaacatggggagaagctctacacaggcctgagggaggtcgtcaca
gagcacctcatcaacaaagtacgggaagatgtcttaaactctctaaataataattttctg
caaacactgaatcaggcgtggaatgaccatcagactgccatggttatgatcagagacatc
ctcatgtacatggaccgtgtctatgttcaacaaaacaatgtggagaatgtgtacaacctc
ggcctcatcatattcagagaccaggtggtgcgctacggttgcatccgagaccatttacgt
cagacgttactggacatgattgctcgtgagaggaagggagaggtggtcgaccggggcgcc
atcagaaacgcctgccagatgctgatgatacttggcctggacggcaggtctgtatacgag
gaagactttgaaggtcctttcttagatatgtcagcagaattcttccagatggaaagccaa
aagttcctagcagaaaacagtgccagtgtgtacattaagaaggtagaggccagaatcaat
gaggagattgagcgagttatgcactgcctagacaagtctacagaagagcccatcgtcaag
gtggtggaaagggagctcatttctaagcacatgaagaccattgtggagatggagaactct
ggcctcgttcatatgctcaagaacggcaagacggaagacctggcatgcatgtacaagctg
ttcagtcgtgtgccaaatggcctgaaaactatgtgcgagtgtatgagctcttacttgagg
gagcaaggcaaagctctagtgtcagaagagggagagggcaagaaccctgtcgactatatc
cagggcctgctagacctgaagacgcgatttgatcgtttcctcctcgagtccttcaacaat
gacagacttttcaaacaaaccatagcaggagactttgagtatttcctcaacctcaactcc
cgctcaccagagtacctgtcactctttattgatgacaagctcaagaagggtgtcaaaggg
ttaacagaacaggaggtggagtcgatccttgaaaaggccatggtgttgttccggtatatg
caagagaaggatgtgtttgaaaggtattacaagcagcatctgggccgcaggctcctcagc
aacaaaagtgtttcagacgactccgagaagaacatgatctctaagctcaagacagaatgt
ggctgtcagttcaccacgaaactggaagggatgttcagagacatgaccatatccaacacg
accatggatgagttcaggcaacacatacaaaccacgtcggcatctctaagtggtgtggac
ctcacagtaagagtcctaactactggctactggccgacacagtcggcaacacctaaatgc
accatccccccctctcccagacacgcctttgaagtctttagaagattttacctcgctaag
cacagtggtaggcagctcacactgcaacaccatatgggcggggcagacctaaacgcaact
ttctacggaactattaaaaaggaggatggctcagaggtgggtgtgggaggtgcgcaggtg
actggctcgaacacccgcaagcacatactgcaggtctccactttccagatgaccatcctc
atgctcttcaacaacagagaaaagtgcacattcgaggagatccagcaggagacggatatt
cctgaacgggagttggtgcgagcgctgcagtctttggcctgtgggaaaccaacacagaga
gttctcaccaaggagccgaagtctaaggagattgagagcggccacctgtttacagttaat
gatcagtttacttccaaactgcacagagtcaaaatacagacagttgctgctaaacaaggg
gaatccgaccccgaaaggaaagagacgcggcagaaagtggatgacgaccggaagcatgag
attgaggcagccattgtccgaatcatgaagtcaaggaagaagatgcagcacaatgtcctg
gtggctgaggtaactcagcagctacgggcacgttttcttccgagccctgtcgtaattaaa
aagcgtatagaaggactaatagaaagagaatacttggcaaggacgccagaagatcgcaaa
gtatacacctacgttgcatag

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