Cyclopterus lumpus (lumpfish): 117745977
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Entry
117745977 CDS
T09199
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117745977 (ubtfl)
03021 Transcription machinery [BR:
clum03021
]
117745977 (ubtfl)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
117745977 (ubtfl)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
117745977 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117745977
NCBI-ProteinID:
XP_034410570
Ensembl:
ENSCLMG00005015791
UniProt:
A0A8C3A0T0
LinkDB
All DBs
Position
17:23296876..23305529
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AA seq
695 aa
AA seq
DB search
MMNGSSSVSVAQSSRIKNEPDDWTKEDCLTLLERIRSLLPDDDGMKYKTTESHYDWDKVG
FGRFSGDTCRHKWQKVSSEVRKYRTMTELIVDAMEFVKNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYVTEFQQEKEAFEKNMARF
KEEHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPEVSPKELKEALRRQWSQLSD
KRRLKWISKALELQKDYEGSMRAYHEAHPDVTSDDHVRSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKRWKLMTQKEKDMFQKRCEQRKKQYDVDLQRF
LESLPDEERDRVMGEEKPGGSRGGVASSPHRAKSLAKVVSLGREAEPETWTPAGQPKDRR
DGKKTAKLPETPKTAEEMWQHSVMGDYLAKYRSDRRKAQAAVEAAWKSMEKKEKIPWIKK
AAEDQKRYEVQYQHVRELLDMRTPPAAQNQRKPKFDGEPKKPPVSGYQMFSQELLTNGEL
NHFSLKERMVEIGKRWHKLTQSQKDKYKKMVEEQQGEYKAELEDWVESLSPQERAVYKEF
SSSKRRSNTKVRSSPAAKVRVTAKGKAASSRAATQPVGVAKRAMAYRAKQDMSDSTEKSD
SSDSDEDDETSGSTDSDDDDEDQSSSDESSDSDSD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcagcagcagcgtctcggtggctcagagctccaggataaaaaacgaacca
gatgactggacgaaggaggactgtctcactctcctggagaggattcgttctctgttgccg
gacgacgacggcatgaagtacaaaaccaccgagtcgcactacgactgggacaaagtcggt
ttcggccgcttctccggagacacatgccgccataaatggcagaaagtttcctctgaggtc
cgtaagtaccgaacgatgacggagctcatcgtggacgccatggagttcgtgaagaatccg
tacaaagggaagaaactgaagactcatccagatttccccaaaaagcctctgactccatac
ttccgcttcttcatggagaaacgagccaaatacgccaaaatccacccggagatgagcaac
ctggacctgaccaagatcctgtccaagaagtacaaggagctgcccgacaagaagaagcaa
aagtacgtcacagagtttcaacaggagaaagaagcgtttgagaagaacatggctcgattc
aaggaggagcaccccgagctgatcgaggagaggaagaagtccgacctgccggagaaaccg
aaaactcctcaacagctgtggtacaaccacgagaagaagacctacatgaagctgcaccca
gaggtgagtccgaaggagctgaaggaggctctgaggagacagtggtcccaactgtctgac
aagaggagactcaagtggatcagcaaggccctggagctccagaaggactacgagggcagt
atgagagcatatcatgaagctcatccagatgtgacctctgatgatcacgtccggtccgtc
ctcactaaagcagagagacagctgaaggacaaatttgatgggcggccaacaaaaccacca
cccaacgggtactccctgtactgcgccgagctcatggtgaacatgaaggatgtgcccagc
acggagcgcatggtgctctgcagcaagcgctggaagctgatgacgcagaaggagaaggac
atgttccagaagcgctgcgagcagaggaagaagcagtacgacgtggacctgcaaaggttc
ctggagagtcttccggacgaggaacgtgaccgcgttatgggcgaggagaaaccgggcggg
tccagagggggcgtggcctccagcccgcacagagccaagtctctggccaaggtggtgtct
ctcggtcgggaggcggagccagagacgtggacgcctgccggacaaccaaaggaccgacgg
gacgggaagaagacggcgaagctcccggagacgccgaaaaccgctgaagagatgtggcag
cacagcgtgatgggagactacctggccaaatacagaagcgaccgcaggaaggctcaggct
gcggtcgaggcggcctggaagtcgatggagaagaaggagaagattccttggatcaagaag
gcggcggaggaccagaagcgttacgaggttcagtaccaacatgtgagggagctgttggac
atgaggactccacctgcagctcagaaccagaggaaacccaagtttgatggagaaccaaag
aaacctccagtgagtgggtatcagatgttctcccaggagttgctgaccaatggcgagctg
aaccacttcagcctgaaggagcgcatggtggagatcgggaagaggtggcacaaactgacc
cagagtcagaaagacaagtacaagaagatggtggaggagcagcagggggagtacaaggcc
gagctggaggactgggtcgagtctctgtctcctcaggaacgagccgtctacaaagagttc
tcctcctcgaagcgtcgcagcaacactaaagttcgcagcagtccagcagctaaagtccgc
gtgacggcgaaggggaaggcggccagttcgagagccgcaacgcagccggtcggcgtcgcc
aagagggcaatggcgtacagagccaagcaggacatgtccgactccaccgagaagagcgac
tcgtccgactctgatgaagatgatgagacgtcaggaagcacagacagtgacgacgacgat
gaagatcagagctcctcggatgaatccagtgactctgactcggattag
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