Cyclopterus lumpus (lumpfish): 117746010
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Entry
117746010 CDS
T09199
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117746010 (irf4a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117746010 (irf4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
117746010
NCBI-ProteinID:
XP_034410635
Ensembl:
ENSCLMG00005001729
LinkDB
All DBs
Position
17:complement(15140081..15146697)
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AA seq
465 aa
AA seq
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MIDEMNLDEDSGLPVSCGNGKLRQWLIDQIDSSLYPGLVWENDGKSIFRIPWKHAGKQDY
NRDEDAALFKAWAMFKGKYKEGVDKLDPPTWKTRLRCALNKSNDFDELVERSQLDISDPY
KVYRIIPEAAKRGMKTSMEETTSHVNSLGYIPPYTSSHDQVSGYMVSQERRDWRDYSPTE
QQPVPPPHQHGPHAELQYGQLHYPSPFSRAWPGAHTENGFQLSFHTYFSESQPPVYSINQ
NNGITDLSLHVSLYYRESLVKEVTTTSPEGCRITSHSSSSPSSSSSSSPCLEDKLHSGAE
IILFPFPYPESQRQGAEMLPNVLERGVLLWMTPDGLYAKRLCQGRVYWEGPLAPHMDKPN
KLEKEQPCKLFDTQQFLIELQEFAHNGRHLPRHQVVLCFGDEYPDPQRTRKMITAQVEPV
FARKLVYYYQQNNGHYLRALDHIQEQNTSTTSDYPSQRPLQHIQE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgagatgaaccttgatgaggacagtgggctgccagtcagctgtggcaatgga
aaattgagacagtggctgatagatcagattgacagcagtctatatcccggcctggtttgg
gaaaatgatggaaagagcatctttaggattccgtggaaacatgcaggaaaacaagactat
aacagagacgaggatgcggcgctcttcaaggcatgggcaatgtttaaggggaaatataag
gagggagtggacaagctggatccccccacatggaaaaccagactgcgctgtgctcttaat
aaaagcaatgattttgatgagttagtggaaagaagccaactggacatctcagacccctat
aaagtctacagaatcattccagaagctgccaaaagaggaatgaagacaagtatggaggag
acaacatcacatgtaaattccctcggctatattcctccatatacgtcttcacatgaccag
gtatcaggctatatggtttctcaggagagaagggactggagagattactcacccacagaa
cagcaacctgttcctcctccacatcagcacgggccccatgcagagctgcagtacggtcag
ctccactatccgtcaccgttcagccgggcttggcccggggcacacacagaaaatggtttt
cagctctccttccacacctacttttcagagtcccaaccacctgtgtattcaatcaaccaa
aacaatggcataacagatttgagcttgcatgtgtccctatactacagagagtcattggtg
aaggaggtcaccaccaccagcccagaaggttgtcggatcacttctcattcctcctcctct
ccatcctcttcttcctcctcttccccatgcctagaggacaagcttcacagcggtgcagaa
atcatcctttttccattcccgtaccctgagtctcagaggcagggtgctgagatgcttcct
aatgtactggagaggggggtgctgctgtggatgacacctgatgggttgtatgctaagcgc
ctctgccagggacgggtttactgggaaggacctctggctcctcatatggataaacccaac
aagctggagaaggagcagccatgcaaactgtttgacacccagcaattcctgattgagctc
caagagtttgcccataatggccgacatttaccgaggcaccaggtggtgctgtgttttgga
gacgagtaccccgacccacagcgcacgaggaagatgatcacagcacaggtggagccagtg
tttgccagaaaactggtgtactattaccagcagaacaatggccactacctgcgggctctt
gatcacatccaggaacagaacacatcgacaacaagcgactatccttcccagagaccgcta
cagcatattcaggagtga
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