Cyclopterus lumpus (lumpfish): 117746027
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Entry
117746027 CDS
T09199
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117746027 (zeb1a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
117746027 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_6
Homeodomain
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
117746027
NCBI-ProteinID:
XP_034410676
LinkDB
All DBs
Position
17:21652734..21692874
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AA seq
1332 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTDFNNGLEASSDSDDEDKLHIVEEDSLQEPEVANADGTKA
QASHDAAKPAKPATVLPHNGPLNGVKEEYVSEEEEEAEKDALVDEILQQGDTAVIYPEAP
EDEQSPAETGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSEDNYSCTHC
SYTFTYRSQLERHMSHHRGTREQRHVSQSTGGSGGIGGNRKFKCTECCKAFKYKHHLKEH
LRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVGAAPPNGAPRTSIKSPPPAAQTTPA
AIAPARVILKEKAESKPLQEQLPVTQIKSEPVEYECKPAAASAGANGVTNNGGGAAQPSV
VPAASLPQGVAMVVPTVGLMSPISINLSDLQNVLKVAMDGNVLRQVLGTANGVVTQGKQG
FVVQQPQQQIISLPAFVDHDGTTKIIINYSISPAAGTTATTHTAGFVAKTNPAPLPTVTT
AAAPTPTKTDKPSTPGVTDLSIVKAEPESMAVTEAVTRTQTTSKVTGTGTCLLCDDCPDN
LEALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLLSLLKTYFASDANP
GERELTKISESVSIHVDVVRKWFAKMNSGKGAGSFRKKAAADSKHAAKSRSEDGASRNGP
AEDDGSRETPDKASSGSGSASPSDSSRLSLNAGDLVIVKSEPEDPDSLVSQAEPLDLSLP
KHAAAAALETVAPPPAKQQEQPLNLTCLRKEQLEGRTVYVTAPQTGTPVSIVTAAQLPTL
VAIGGQGAVSCLNAINGAAKRTILIPQLTYTYATVAGSATGAKTVVLNGHKQDKRRDCSS
SAVSPVDEQSDSDSPALMKKRRLENGVYPCDLCSKVFQKGSSLLRHKYEHTGKRPHECNV
CKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDGPGSGSG
PELGVRSELGSPGAGLQSDSRTTTPPSQLDSDERESEDEEAMCMDDIRVVQVDDDECEIY
EGNFEDEEDEEIEDGEEIEGDEEIEEDEEIEGDEEIEGDEEIEEDEEGEEIAEGEEIVED
EEIVEDEEIEEGEEIEEGEEIAENEEIAENEEIAEDEEIAEEEEIAENEEIAENEEIAED
EEIAEDEEIAEKEEIAENKEIAENEEIAENEEIAEDEEIAEKEEIAENKEIAENEEIAEN
EEIAENKEIVEKGENEENEEIAENEEITEGKENEENAEEDAIGEEEAEGEKVDEKVACDV
VEVEVGGDHMGDEEMGDEEMGDEEMGDATEEKKEATDDAEETPDCEANTDKSAREESDSG
EPAEEAAAADAK
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagcggagcagcgtg
acagacttcaacaacggcttggaggccagttcggactctgacgacgaggacaagctacac
attgtggaggaggacagcctgcaggagcccgaggtcgccaacgccgacgggaccaaagcg
caggccagccatgacgccgccaaacccgccaaacccgccacagtattaccccacaacggc
cccttgaacggagtgaaggaggagtatgtgtcagaagaggaagaggaggctgagaaggat
gctctcgtggatgagatcctccagcagggagacacggccgtcatctaccccgaagcaccg
gaggacgagcagagcccggcggagacgggcggcgccgacgaaaacggcaccccggactcc
ttctcccagctgcacacctgcccctactgctcccggggctacaagcgcaacgcctcgctg
aaggagcacatcaagtatcgccacgagaccagcgaggacaactacagctgcacgcactgc
agctacaccttcacctaccgctcgcagctggagaggcacatgagccaccaccggggcacc
cgggagcagcgtcacgtctcccagtcgaccggcggctcagggggaatcggtggaaaccgc
aagttcaagtgcaccgaatgctgcaaggccttcaagtacaagcatcacctgaaggagcac
ctgcgcattcacagcggtgagaaaccgtatgagtgctcaaactgcaagaagcggttctcc
cactcgggctcctacagctcccacatcagcagtaagaagtgcgtgggggcggcgcctccc
aacggcgcgccccgaacgtcgatcaaatccccgccgcccgccgcccagaccacgccggct
gcaatcgctccggcccgcgtgatcctcaaggagaaggccgagagcaaacccctccaggag
cagctccccgtcacccagatcaaatctgagcctgtggaatacgagtgcaagcccgcggcg
gcttcagccggcgccaacggcgtcacgaacaacggaggaggggcggcacagccgtccgtg
gtcccggccgccagcctcccccagggcgtggccatggtagtgccgacggtcggcctcatg
tcgcccatcagcatcaacctgagcgacttgcagaatgtgctcaaggtggcgatggatgga
aacgtgctcaggcaggtgctgggcacggccaacggcgtggtgacgcaggggaagcagggg
ttcgtggtccagcagccgcagcagcagatcatcagcctgccggccttcgtggaccacgac
ggcaccacgaagatcatcatcaactacagcatcagccccgcggccggcaccaccgccacg
acccacaccgccggtttcgttgccaagaccaacccggctcctcttcccacggtcaccacg
gccgcagcccccacccccaccaagaccgataaaccctcgacaccaggggtgaccgacctc
tctatcgtaaaggcggagccggaatcgatggccgtcacggaggcggtcacgcggacgcaa
acgacttcaaaagtcaccggcaccggcacgtgtttgctgtgcgacgactgccccgacaac
ctggaggcgctgcacctcctgcagcaccgcaaggccgccaacggggaggccgtggactcc
gccgccctggacccctcgttcgccgctctgctcagcgaggcgggggtgacgctggaggag
ccgcccgtggacgacctcctctcgctcctcaagacctacttcgcctccgacgccaacccc
ggcgagcgggagctgacgaagatctcggagtccgtcagcattcacgtggacgtggtcagg
aagtggttcgcgaagatgaactctgggaagggtgcgggcagcttccgcaaaaaagccgcg
gcggattcaaaacacgccgccaagtcccgctcggaggacggcgcgagtcggaacgggccg
gcagaggacgacggctcccgggaaacgcctgacaaagcctcgtcgggatctggcagcgcc
tccccgtcggactcttcacggctcagcctcaacgccggggacctcgtcatcgtcaagagc
gagccggaggacccggactcgcttgtctctcaggccgagccgctcgacctctccctcccg
aaacacgcggcagcggcggcgttggaaacggtcgcgcctcctcccgccaagcagcaggag
cagcccctgaacctgacctgcctgaggaaggagcagctggagggtcggaccgtctacgtc
accgcgcctcagaccggaacgcctgtgagcatcgtcaccgccgcgcagctgcccacactg
gtggccatcggcgggcagggcgcggtgagctgtctcaacgccatcaacggcgccgcgaag
cgcaccatcctcatcccccagctcacgtacacctacgccactgtggccggcagcgccacc
ggagcaaagactgtcgtactgaacggccacaagcaggacaagaggcgggactgcagctcc
agcgccgtctcgccggtggacgagcagagcgactctgattcgccggcgctgatgaagaag
cggcggctggaaaacggcgtctacccgtgtgacctttgctccaaagtcttccagaagggc
agctccctgctcaggcacaaatatgaacacacaggaaaacgcccccacgagtgcaacgtc
tgcaagaaggccttcaagcacaaacaccacctgatcgaacactcccggctgcactccggg
gagaaaccctaccagtgcgacaagtgcgggaagcggttctcccactctggctcttactcc
caacacatgaaccaccgctactcctactgcaagaaggacgggccgggatccggctcgggg
ccggagctcggcgttcggtcggagctcggcagccccggagccggactgcagtcggacagt
cggaccacgaccccgccctcccaactggactcggacgagagggagagcgaggacgaggag
gccatgtgcatggacgacatccgggtggtgcaggtggacgacgatgagtgcgagatctac
gagggtaactttgaggacgaggaggatgaggagatcgaggatggcgaggagatcgagggg
gacgaggagattgaggaggatgaggagatcgagggggacgaggagatcgagggggacgag
gagattgaggaggacgaggagggcgaggagatcgcagaaggcgaggagattgtggaggac
gaagagatcgtggaggacgaggagatcgaggagggcgaggagatcgaggagggcgaggag
atcgcggagaacgaggagatcgcggagaacgaggagatcgcggaggacgaggagatcgcg
gaggaagaggagatcgcggagaacgaggagatcgcggagaacgaggagatcgcggaggac
gaggagatcgcggaggacgaggagatcgcggagaaagaggagattgcggagaacaaggag
atcgcggagaacgaggagatcgcggagaacgaggagatcgcggaggacgaggagatcgcg
gagaaagaggagattgcggagaacaaggagatcgcggagaacgaggagatcgcggagaac
gaggagattgcggagaacaaggagatcgtggagaaaggggagaacgaggagaacgaggag
attgcggagaacgaggagatcacagagggcaaggagaacgaggagaacgcggaggaagac
gcgattggagaggaagaggcggagggggagaaggtggacgagaaggtcgcctgtgacgtg
gtggaggtggaggtggggggcgatcacatgggagacgaagagatgggagacgaagagatg
ggagacgaagagatgggagacgcgaccgaagaaaagaaggaagcgacagacgacgcggag
gagacgccagactgtgaagctaatacggacaaaagcgccagggaggagtcggacagcggc
gaacccgcggaggaagcggcggcagcagacgccaaataa
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