Cyclopterus lumpus (lumpfish): 117746038
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Entry
117746038 CDS
T09199
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117746038 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
TA_inhibitor
Motif
Other DBs
NCBI-GeneID:
117746038
NCBI-ProteinID:
XP_034410703
Ensembl:
ENSCLMG00005013297
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All DBs
Position
17:21238575..21249233
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AA seq
701 aa
AA seq
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MDLLSSKWLVNLLVCCLFVGVGCNSVEKKIYVNLNYTVPCVRLLNATHQIGCQSHLSGNV
GVLHVLESEENLDWVLHSGLTPPYLVILESSLFTRSIMMKLKNGSSRVAGVAVVTPNANP
SQGTSPHTSCPNENTGVYTENYDPTMARCNVTVWNPLGTGLSYEEFDFPIFAMKEDNDTQ
VIRQCYMDHNRAGNGSTPQYPLCAMQLYSHMSAVTDTATCMRRNNINFSLSPEMVCDPLS
DFNVWASTRPLNNTAKGHKEGESVVLAAARLDSRSFFFDIAPGAESGVSGFVALLAAAHA
LRNATQEAPPPRNILYAFFHGETFDYIGSSRMVYDMEKNNFAVDLDNIHSVLEVGQVGLH
AESRLWLHSDPVSRKNSSVNEEVKKLILRLQSAASGLNVSVEEPGFSQPLPPSSFQRFLR
ARPIPGVVIEDHRSAFTNSFYESMYDNAEYLNISYPPDLTPDEQLEYVTDTAKALTEVAT
VVARTLYIQAGGAESRLGSINADPQMVTRILYGFLVRSNNSWFQQLIPSDLVSHLTDRPT
NFYVGVAQQPGKPTLLVQYLLANLTGSTVNVSQDDCWNQRVEEQDKESKHMYSYLWVQGA
APPNSTERVGFCMRSAARLSKALSPAFDLHEYTSKDYSTWTESRWKTIKGRIFLVASHEL
EMLTLGVGVGVLLTSLMLTYIMSSKADILFSSGREPANATY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctgtcgagcaaatggctcgttaatctgctcgtctgttgccttttcgtcggc
gtcggctgtaattcggtggaaaagaagatttacgtgaacctcaattacaccgtcccgtgt
gtgcgactgctcaacgccacgcatcagataggctgccagtcccatttgtccggtaatgtg
ggcgtgctccatgtgctggagtcggaggaaaacctggactgggtcctgcactctggtctc
actcctccgtatctggttatcctggagtcctcgctctttaccagatccatcatgatgaag
ctgaagaacggctccagcagggtggcgggcgtcgctgtcgtgacgccaaacgcaaacccg
tcccagggcacctccccgcacaccagctgtcccaacgagaacacgggcgtgtacacggag
aactacgatccgaccatggcccgctgtaacgtgacggtgtggaacccgctgggaaccggc
ttgtcctacgaggagttcgacttccccatcttcgctatgaaggaggacaatgacacgcag
gtcatacggcagtgctacatggaccacaaccgcgccgggaacggcagcaccccccagtac
ccgctgtgcgccatgcagctctactcccacatgtcggccgtcaccgacacggccacctgc
atgcggaggaataacatcaacttcagcctcagcccggagatggtttgcgacccgttgagt
gactttaatgtttgggcctccactcgacctctcaacaacacggccaagggccacaaggag
ggggagagcgtggtgctagcagcagccaggttggacagccggtcttttttcttcgacatc
gctccgggagcagagagcggcgtctccgggttcgtcgctctgctggcggccgctcacgct
ctgaggaacgccacccaggaggccccgcccccacgcaacatcctctacgccttctttcac
ggggaaaccttcgactacatcggcagctcgaggatggtttatgatatggagaagaataac
tttgctgtggacctggacaacattcactcggtgctggaggtcggacaggtcggcctgcat
gctgaatccagactgtggcttcactccgaccccgtttccaggaagaacagcagcgtcaat
gaagaggtgaagaagctcatcctccgcctgcagtcggccgcctcgggcctgaacgtctcg
gtggaggagcccggcttctctcagcccctcccgccctcctccttccagcggttcctgcga
gctcggccgatccccggcgtcgtcatcgaggaccaccggtctgctttcaccaacagcttc
tacgagagtatgtacgataacgccgaatacctcaacatatcctacccgccggacctgacg
ccggacgagcagctcgagtacgtcacggacaccgccaaggctctgactgaggtggccacc
gtggtcgcccggactctgtacatccaggcaggcggagcagagagccggcttggcagcatc
aacgccgaccctcaaatggtgacccggattctgtacggtttcctggtccgctccaacaac
tcctggttccagcagctgatcccctcggacctcgtgagccacctgacggaccggcccacg
aacttctacgtgggcgtggcccagcagcccggcaagcccaccctgctggtccagtacctg
ctggctaacctgaccggcagcaccgttaacgtcagccaggacgactgctggaaccagagg
gtggaggagcaggacaaagagagcaaacacatgtactcctacctgtgggttcagggcgcg
gcgccccccaacagcaccgagcgggtgggcttctgcatgcgctccgcggcccgtctctcc
aaggcgctgtcgccggccttcgacctgcatgagtacacctccaaagactactcgacgtgg
accgagtcgcggtggaagaccatcaaaggacgcatcttcctggtggcgagtcacgaactg
gagatgttgacgctcggcgtgggcgtcggcgtgctgctgacgtccctgatgctgacgtac
atcatgagctccaaggccgacatactcttcagctcggggagggagcccgccaacgccacc
tactga
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