KEGG   Cyclopterus lumpus (lumpfish): 117746038
Entry
117746038         CDS       T09199                                 
Symbol
ncstn
Name
(RefSeq) nicastrin
  KO
K06171  nicastrin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    117746038 (ncstn)
SSDB
Motif
Pfam: Nicastrin Ncstrn_small Peptidase_M28 TA_inhibitor
Other DBs
NCBI-GeneID: 117746038
NCBI-ProteinID: XP_034410703
Ensembl: ENSCLMG00005013297
LinkDB
Position
17:21238575..21249233
AA seq 701 aa
MDLLSSKWLVNLLVCCLFVGVGCNSVEKKIYVNLNYTVPCVRLLNATHQIGCQSHLSGNV
GVLHVLESEENLDWVLHSGLTPPYLVILESSLFTRSIMMKLKNGSSRVAGVAVVTPNANP
SQGTSPHTSCPNENTGVYTENYDPTMARCNVTVWNPLGTGLSYEEFDFPIFAMKEDNDTQ
VIRQCYMDHNRAGNGSTPQYPLCAMQLYSHMSAVTDTATCMRRNNINFSLSPEMVCDPLS
DFNVWASTRPLNNTAKGHKEGESVVLAAARLDSRSFFFDIAPGAESGVSGFVALLAAAHA
LRNATQEAPPPRNILYAFFHGETFDYIGSSRMVYDMEKNNFAVDLDNIHSVLEVGQVGLH
AESRLWLHSDPVSRKNSSVNEEVKKLILRLQSAASGLNVSVEEPGFSQPLPPSSFQRFLR
ARPIPGVVIEDHRSAFTNSFYESMYDNAEYLNISYPPDLTPDEQLEYVTDTAKALTEVAT
VVARTLYIQAGGAESRLGSINADPQMVTRILYGFLVRSNNSWFQQLIPSDLVSHLTDRPT
NFYVGVAQQPGKPTLLVQYLLANLTGSTVNVSQDDCWNQRVEEQDKESKHMYSYLWVQGA
APPNSTERVGFCMRSAARLSKALSPAFDLHEYTSKDYSTWTESRWKTIKGRIFLVASHEL
EMLTLGVGVGVLLTSLMLTYIMSSKADILFSSGREPANATY
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggatctgctgtcgagcaaatggctcgttaatctgctcgtctgttgccttttcgtcggc
gtcggctgtaattcggtggaaaagaagatttacgtgaacctcaattacaccgtcccgtgt
gtgcgactgctcaacgccacgcatcagataggctgccagtcccatttgtccggtaatgtg
ggcgtgctccatgtgctggagtcggaggaaaacctggactgggtcctgcactctggtctc
actcctccgtatctggttatcctggagtcctcgctctttaccagatccatcatgatgaag
ctgaagaacggctccagcagggtggcgggcgtcgctgtcgtgacgccaaacgcaaacccg
tcccagggcacctccccgcacaccagctgtcccaacgagaacacgggcgtgtacacggag
aactacgatccgaccatggcccgctgtaacgtgacggtgtggaacccgctgggaaccggc
ttgtcctacgaggagttcgacttccccatcttcgctatgaaggaggacaatgacacgcag
gtcatacggcagtgctacatggaccacaaccgcgccgggaacggcagcaccccccagtac
ccgctgtgcgccatgcagctctactcccacatgtcggccgtcaccgacacggccacctgc
atgcggaggaataacatcaacttcagcctcagcccggagatggtttgcgacccgttgagt
gactttaatgtttgggcctccactcgacctctcaacaacacggccaagggccacaaggag
ggggagagcgtggtgctagcagcagccaggttggacagccggtcttttttcttcgacatc
gctccgggagcagagagcggcgtctccgggttcgtcgctctgctggcggccgctcacgct
ctgaggaacgccacccaggaggccccgcccccacgcaacatcctctacgccttctttcac
ggggaaaccttcgactacatcggcagctcgaggatggtttatgatatggagaagaataac
tttgctgtggacctggacaacattcactcggtgctggaggtcggacaggtcggcctgcat
gctgaatccagactgtggcttcactccgaccccgtttccaggaagaacagcagcgtcaat
gaagaggtgaagaagctcatcctccgcctgcagtcggccgcctcgggcctgaacgtctcg
gtggaggagcccggcttctctcagcccctcccgccctcctccttccagcggttcctgcga
gctcggccgatccccggcgtcgtcatcgaggaccaccggtctgctttcaccaacagcttc
tacgagagtatgtacgataacgccgaatacctcaacatatcctacccgccggacctgacg
ccggacgagcagctcgagtacgtcacggacaccgccaaggctctgactgaggtggccacc
gtggtcgcccggactctgtacatccaggcaggcggagcagagagccggcttggcagcatc
aacgccgaccctcaaatggtgacccggattctgtacggtttcctggtccgctccaacaac
tcctggttccagcagctgatcccctcggacctcgtgagccacctgacggaccggcccacg
aacttctacgtgggcgtggcccagcagcccggcaagcccaccctgctggtccagtacctg
ctggctaacctgaccggcagcaccgttaacgtcagccaggacgactgctggaaccagagg
gtggaggagcaggacaaagagagcaaacacatgtactcctacctgtgggttcagggcgcg
gcgccccccaacagcaccgagcgggtgggcttctgcatgcgctccgcggcccgtctctcc
aaggcgctgtcgccggccttcgacctgcatgagtacacctccaaagactactcgacgtgg
accgagtcgcggtggaagaccatcaaaggacgcatcttcctggtggcgagtcacgaactg
gagatgttgacgctcggcgtgggcgtcggcgtgctgctgacgtccctgatgctgacgtac
atcatgagctccaaggccgacatactcttcagctcggggagggagcccgccaacgccacc
tactga

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