Cyclopterus lumpus (lumpfish): 117746144
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Entry
117746144 CDS
T09199
Name
(RefSeq) ubiquitin-protein ligase E3A isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117746144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117746144
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117746144
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117746144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
117746144
NCBI-ProteinID:
XP_034410929
Ensembl:
ENSCLMG00005007685
LinkDB
All DBs
Position
2:12461552..12469648
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AA seq
907 aa
AA seq
DB search
MKRAAAKHLIERYYHQLTEGCGNESCSTSWCASSAGFTRMDNNAAAVKALELYKVNATLC
DPHPSKKVTASAYLESNSAGNRKSNHKDVHSVRDNFRDVNYLTEDKVYEILDICGEKEDY
SPLIRVLGRVFSSAEGLVQSFRRSKPHTKEELKSLQGKDEDKDEDEKEAAACSAMEEDSP
PSSSSSRLGEGSSGGNDVQKLGPDEVSVDIEAVRRVYERLLSNEKIEAAFLNALVYLSPN
VECDLTYHNVYSQDLNYLNLFVIVMENSNLHSPEYLEIALPQFCKAMSKLPLSALAKLAR
LWSHYSTEQIRRMVETFQQLITYKVISNEFSSRNLVNDDDAVVAATRCLKIVYYANVLGG
DLDTEHNEDEDEEPIPESSELTLQELLGEERRNKKGPRVDPLETELGIRTNDCRRPLVAF
EEFVNEPLNEVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERR
ITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVD
EGGVSKEFFQLVVEEIFNPDIGMFTYDERTKLFWFNPSSLENEGQYTLIGIVLGLAIYNN
CILDVHFPMVVYRKLMGKKGTFRDLADANPVLFQSLKELLEYDGNVEEDMMITFQISQTD
LFGNPLMYDLRENGDKIPVTNENRKEFVAQYAEYMLNKSVEKQFKAFRRGFHMVTNESPL
KYLFRPEEIELLICGSRVSSVSRRWDSLRPLAQSLHPLLSCAAEPGLPGSGRDHRIRWRL
QPRLSNHQGVLGDVALVRGGAEAPLPAVHHRHRQSTCGRAGQAEDDHRQERPRHGQVTDI
SHLLQCAAAARVQRPGEAEGETAESRHLRQRVRHALSPAPSPAPSGLVLRKPIRPGPAFL
YQTQAKR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcagctgccaaacatctaatagagcgctactaccaccagttgaccgagggc
tgtgggaatgagtcctgctccacctcgtggtgcgcctcgtcagccggcttcacccgcatg
gacaacaacgcagcggccgtcaaagccctggagctctacaaggtcaacgccacgctatgc
gacccccacccctcaaagaaagtcaccgcctcggcctacctggagagcaactccgccggt
aacaggaagtcgaaccataaagacgtccactccgtacgggacaatttcagagatgtaaat
tacctgacggaggacaaagtctatgagatcttggacatctgcggagagaaggaagattac
tcccctctgatcagggtattgggtcgggtgttctccagtgctgagggcctggtgcagagc
ttccggaggtccaaacctcacaccaaagaggagctcaagtccctccaaggtaaggatgag
gacaaggacgaggatgagaaggaggccgctgcctgttccgccatggaggaggactccccg
ccctcctcttcatcatcaagactcggagagggctcctcggggggaaacgatgtccaaaag
ctgggccccgatgaggtgtcggtggacatcgaggccgtccggcgggtatacgagcgcctg
ctgtccaatgagaagatagaagccgccttcctgaacgcgctggtctatctctcacccaac
gtagagtgcgatctgacctaccacaacgtgtactcgcaagacctgaactacctgaacctg
tttgttatcgtgatggagaacagcaacctccacagcccagagtacctggagatcgccctg
ccacagttctgcaaggccatgagcaaactcccactgagcgctctggccaaactggcccgc
ctgtggtcgcactacagcacggagcagatccggcgtatggtggagaccttccagcagctc
atcacctacaaggtgatcagtaacgagttcagcagccgcaacctggtcaacgacgacgac
gcggtggtggcggccaccaggtgcctgaagatcgtctactacgccaacgtgctcggcggc
gacctcgacacggagcacaatgaggacgaggacgaggaacccatccctgagtccagtgag
ctcaccctgcaggagctgctgggcgaggaacggaggaacaagaagggccctcgggtggac
ccgctggagacggagttggggatccgcaccaacgactgccggcggccgctcgtcgccttt
gaggagtttgtcaacgaacctttaaacgaggtgctggagatggacaaggactacactttc
tttaaggttgaaaccgaaaacaagttctccttcatgacctgccccttcatcctgaacgcc
gtcaccaagaacctgggtctctactacgacaaccgcatccgcatgtacagcgagcggcgc
atcaccgtgctctacagcctggtgcagggccagcagctcaacccctacctgaggctcaaa
gtgaggcgagaccacatcatcgacgacgctctggtccggctggaaatgattgcgatggag
aaccctgcagacctgaagaagcagctgtatgtggagtttgaaggagagcaaggcgttgat
gaaggaggcgtttccaaagaattcttccagctggtggtggaggagatctttaacccagat
attggcatgttcacgtatgacgagcgcaccaagctgttttggttcaacccttcttcgctg
gagaacgaaggccagtacactctgatcggcattgttctgggcctggccatctataacaac
tgtattctggacgtccacttccccatggtggtctacaggaagctgatgggcaagaaggga
actttcagagacttagctgacgccaacccggttctcttccagagtctgaaggaactgctg
gagtacgatggcaacgtggaggaggacatgatgatcacgttccagatctcccagacggac
ctgtttgggaacccactcatgtacgatttgagggaaaatggggacaagattccagtcacg
aatgaaaacagaaaggagttcgtggctcagtacgcggagtacatgctgaacaagagcgtg
gagaagcagttcaaggccttcaggagaggcttccacatggtcaccaacgagtcccccctg
aagtacctgttccgaccggaggagatcgagctcctgatctgtggcagcagggtgagctcc
gtgagcagacgctgggactcgctgcgtcctttagctcaaagccttcatcccctcttgtct
tgtgctgcagaacctggacttcctggctctggaagagaccaccgaatacgatggaggcta
cagccgagactctcgaatcatcaaggagttctgggagacgttgcactcgttcggggagga
gcagaagcgcctcttcctgcagttcaccaccggcaccgacagagcacctgtgggcgggct
gggcaagctgaagatgatcatcgccaagaacggccccgacacggacaggttaccgacatc
tcacacctgcttcaatgtgctgctgctgcccgagtacagcgaccgggagaagctgaggga
gagactgctgaaagccgtcacctacgccaaagggttcggcatgctctgagcccggctccg
agcccggctccgagcggactcgttctcagaaagcccatcagacccggcccggccttcctt
tatcagacacaagctaagaggtga
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