KEGG   Cyclopterus lumpus (lumpfish): 117746180
Entry
117746180         CDS       T09199                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117746180 (kdm4ab)
Enzymes [BR:clum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117746180 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117746180 (kdm4ab)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117746180 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN PHD_2 zf-HC5HC2H ApoB100_4ins PHD Extensin_1 DUF7141 Rad9_Rad53_bind Tudor_5 WcaA_C
Other DBs
NCBI-GeneID: 117746180
NCBI-ProteinID: XP_034411020
Ensembl: ENSCLMG00005015154
LinkDB
Position
17
AA seq 1244 aa
MASNVISQSNGSKGIMTFYPTPEEFKNFSRYIAYVESQGAHKAGLAKIVPPKEWKPRKSY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKSMTVREFRKIANSDKFCSPHYDDFEELER
KYWKNVTFNPPIYGADVNGSLYGPDVKEWNICHLNTILDTVECESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHYGKPKSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLR
HKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYAYHAGFNHGFNCAESTNFATERWIEY
GKQAVLCSCRRDMVKISMDVFVKKFQPDRYEQWLAGRDVLPIDHTRPTPEAKEFLGESFN
DITGNSMESCGDDGERKSTTQRIETKRHRVCLEVPEEVVPKNEDEEDVEQYGKRPRLSLI
PPRTTSQDGKRNKGPPKLVVTPTKLTLLDPFHRSLTQSNSDVGRPPHYTKTRAPAISSQS
QPRNGYLSVSAAPSWTEATTQPARKMGVASLLFHRTMSPKETLQVHSYTIEKQQLQPHTQ
LLVHSYAREHQPRHLQHKTCTLTHTQVQSSPQPESKIIVTNASLNQSEAEGLVDEGQKED
TPEISMPAEVQAEVQAEVQAEVQKPDVKKPDVKKPDVKKPDVKMPDLKMPDLKKPDVKKP
DLKMPDVKMPDVKKPDLKMPDVKMPKVELTCNSTQNTNPQIHLPVMSKTVIEASKHNKRK
SNQSPLVDSGIIAPNDTIPVQKPICDEVKVISQNQHQVSEEQSYCKSVIKKQQLQAQLCK
LPRHHPLIREVHSDNEEYIDEEFEQEEKEEWAKPLTQLWQCRPYNPQAEREYNKSMGQQA
PYCSICLVFYSYHESDSNSGSSSVTLVNRPGGHQWSKPLIPEMCFNTQSSKTNDNGEGQL
SNPHVAEDGTSRLVSCAQCCVRVHTSCYGVNGDEAELDDWLCARCEANATTEDCCLCSLR
GGALQRANDDKWVHVLCAITVLEARFVNITERGPIDLSTIPLPRFKLKCAYCRKRMKREV
NGCCVQCSHGRCSTAFHPTCAQAAGMIMHPDDWPFIVFITCHRHKAPSIPERNKASMREL
SVKQRVICKYRNARYYHSEVVELTAATFYEVVFDDGSYSNNLFPEDIENRDCGRLGPPAE
GDAVQVRWTDGLIYGAKFMASHSIPMYLVEFEDGSQITVKREDIYTLDENLPKRVKSRMS
VASDMRFELFSQSDVKENSKRQRVINSRYRQDYIEPVIYRAIME
NT seq 3735 nt   +upstreamnt  +downstreamnt
atggcgtcaaatgtgatttcccaaagcaatggttccaaggggatcatgaccttttacccc
actcctgaggaattcaagaacttcagccgctacattgcatatgtggagtcccaaggagca
cacaaagcaggcctggctaaaattgtcccaccaaaggaatggaagcccagaaaatcttat
gacgatatagacgatttggtgatccctgcacccattcagcaggtggtgacaggccagtcg
ggccttttcacacaatacaacattcagaagaagtccatgactgtgagagagtttcgcaag
attgccaacagtgacaagttctgtagtccacattatgatgactttgaggagctggaaagg
aagtactggaagaacgtgacatttaaccctcccatatacggggccgatgtcaatggatct
ctttatggccctgacgtcaaagaatggaacatttgccatcttaacactattttggatact
gtggaatgtgaaagcggcatcactattgagggtgttaatacaccctacttgtattttggc
atgtggaagaccacctttgcatggcacactgaggacatggacctctatagtatcaactac
ttgcactatggaaagcccaaatcatggtactgtgttcctccagagcatgggaaacgattg
gagcgtttggctaaagggttctttcctggtagctcccaaaattgtgaggcttttttaagg
cacaagatgactctcatctctccctctatactaaagaagtatggcattccatttgaaaag
attactcaggaggctggtgagttcatggtaactttcccctatgcctatcatgctggtttc
aatcacggtttcaactgtgcagaatccaccaactttgccacagagagatggattgagtac
ggcaagcaagctgttttgtgctcatgcagaagagacatggtgaagatttctatggacgta
tttgtgaagaaattccagccagatcgctatgaacagtggctggcagggcgagatgtgtta
cccattgaccacacacggcccaccccagaggcgaaggagttcctgggcgagtcctttaat
gacatcaccggtaactccatggagagctgtggcgatgatggggagcgaaagagcacgaca
cagaggatagagacaaagagacacagagtctgtctggaagtgcctgaggaagtggttccc
aagaatgaagatgaggaagatgtggagcagtatgggaagcgtcccaggctcagccttata
cctccacgtactacgtcacaagatggcaagagaaataaaggcccaccaaagttggttgtc
acaccaaccaagctcactttattggatccatttcacaggagcctaacccaaagtaacagt
gatgtaggccgccccccacattataccaagactcgcgcacctgcgatctcatctcagtcc
cagcccagaaatggatatttatcagtttcagcagcaccttcatggacagaagccaccact
caacctgcccgcaaaatgggggtagccagcctgctcttccacagaactatgagtccaaaa
gaaactcttcaggtgcacagctacactatagaaaagcagcagctgcagcctcacacacaa
ctgctggtgcacagctatgctagagagcatcaaccacggcatctccagcacaaaacctgc
acattaacccacacacaggttcagtcctcgccacagccagaatctaagattattgttacc
aacgcatcactgaatcaatcagaagcagagggtcttgtcgatgagggccaaaaggaggac
acacctgaaatatcgatgcctgctgaggttcaagctgaggttcaagctgaggttcaagct
gaggttcagaagcctgacgtgaagaagcctgacgtgaagaagcctgacgtgaagaagcct
gacgtgaagatgcctgacttgaagatgcctgacttgaagaagcctgacgtgaagaagcct
gacttgaagatgcctgacgtgaagatgcctgacgtgaagaagcctgacttgaagatgcct
gacgtgaagatgcctaaagttgagctcacctgcaattctacacagaacaccaatccacaa
atccatctcccagtgatgagcaaaacagtgattgaggcctccaagcacaacaagcgaaag
agtaaccaatccccccttgtggatagtggcattatcgccccgaatgacaccattcctgtc
cagaaaccaatctgtgacgaggtgaaggtgatctctcagaatcaacaccaggtgtcagaa
gagcagtcatactgcaagtctgtcataaagaagcaacagctgcaggcccagctctgcaag
ctgccccgtcatcaccctctcatcagggaggtgcacagtgacaatgaagagtacatagac
gaggagtttgagcaagaggagaaagaggagtgggcaaagccgttaactcagttgtggcag
tgtcgcccatataaccctcaggcagagagagagtacaacaagagcatgggccagcaggcg
ccctactgctccatctgcctggtcttctacagttaccatgagtcagactctaatagtggg
agttccagcgtgacgttggtgaaccgtccaggaggccaccagtggtccaagccgctcatc
ccggaaatgtgtttcaacacccaatctagcaagacaaatgataacggggagggacagctg
tctaacccccatgtagcagaggacgggaccagccggctggtcagctgtgctcagtgttgt
gtccgcgtacatacaagttgctatggcgtgaatggggacgaagcagaactagacgactgg
ttgtgcgcccgttgtgaggcgaatgccaccacggaggactgctgtctgtgctccttgaga
ggcggcgctctgcagagagccaacgatgacaagtgggttcatgtgctgtgtgccatcact
gtgctggaagctcgctttgtcaacatcactgagcgaggccccattgacctctctacaatc
ccactgcctcggttcaagctgaagtgtgcatactgcaggaaacggatgaagagggaggtg
aatggctgctgtgtccagtgctcccacgggcgctgctcaacggcgttccaccccacctgc
gctcaggcagctggaatgatcatgcacccagatgactggccgtttatagtcttcatcacc
tgccacaggcacaaagcgccgagcataccagagcgcaacaaggcgtccatgcgtgagctg
tcggttaagcagagggtgatctgtaaatacagaaacgcccgatactaccacagtgaggtg
gtggaactgaccgcagccaccttctacgaggttgtgttcgacgacggctcctacagcaac
aacctcttcccagaggacatcgagaaccgtgactgtggccggctcggtccaccagctgaa
ggtgatgctgttcaggtgcgatggacagatgggttgatatacggagccaagtttatggcg
tcgcactccatccccatgtacctggtggagtttgaggatggatcacaaatcactgtcaag
cgagaagacatctacactctagacgagaatcttcccaaacgagtcaagtcacgaatgtcg
gtggcgtcagacatgcgttttgagctcttctcacagagcgacgtcaaggagaattccaaa
aggcaacgggtcatcaactctcgatacagacaggactacattgagcccgtcatttaccga
gccatcatggagtga

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