Cyclopterus lumpus (lumpfish): 117746210
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Entry
117746210 CDS
T09199
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117746210
Peptidases and inhibitors [BR:
clum01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117746210
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117746210
NCBI-ProteinID:
XP_034411071
Ensembl:
ENSCLMG00005017514
UniProt:
A0A8C3G5Y8
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Position
2:6382548..6406206
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AA seq
1202 aa
AA seq
DB search
MVPSLHLLLLLSGLPGLWAQEHKEDYEVEKKKSRLSPSNSTPQNGKSLISEDCNLELAFL
IDSSESAKDNHAQEKRFASDVMERLQNLRLQTGRSLSSRAALLQYSSHVIIEQTFKQWRG
IDDFKARIAPIVYIGHGTYTTFAITNLTRIYLEESDPNSIKVAVLLFDGISHPRNPDIFS
AVADAKNQGVRFFTVGITPEANAAANIAELRLIASSPASRYLHNLQDRGVVDKFIKEITA
LADEGCPLAQSKCACDKGERGASGPPGKKGRSGEDGSPGSRGAKGEGGLSGLPGRDGTEG
KSGYKGEKGERGECGTPGIKGDRGPEGTIGPRGNRGLQGMLGPPGDIGPEGTMGKKGERG
LSGPPGIQGETGLGLPGPKGDVGYQGQTGPHGPPGLGEHGLPGPQGPQGVQGERGQIGEG
LPGPKGERGLDGPRGLRGQPGAGIKGDKGDFGPPGLPGPLGLPGAGIQGEKGVEGPRGPP
GGRGQQGEGFPGSKGDQGLPGEVGSPGERGAGDPGAKGEPGSTGLSGLPGLPGEDGAPGQ
KGEPGPVGLRGSEGAPGIGTQGEKGDQGQRGIRGLTGPPGIAGPSGPKGEPGSQGRGGLP
GPPGRFVSGPKGDFGPSGPPGPIGETGYGLPGPKGDRGNSGPAGPFGSKGDGYPGPMGPP
GLPGLPGEPGQEGLGIAGPKGDVGFRGLPGLPGPPGEGLQGPLGNPGRPGPPGPTGPQGQ
GVQGPKGEQGSQGVTGPRGIPGEGFPGAKGDRGSSGEKGLKGIKGDFGDSGTPGQPGRSG
VKGEAGLTREDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVNALVD
RVTVGRNATRIGLVLYSLEVRLVFNLARYVNKQDIKQAIRNIPYMGEGTYTGTAIRKATQ
EAFYSSRVGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIVNTSDPTQAEF
RRELNLIASDPDSEHMFLIDDFNTLPALESKLVSQFCEDENGALIYNRINNGNGNNGNRN
GNYAVGGYGYQPATEQQVLTGTSTQSHEGRVETTLHGSIGSSTGQGGRGQLLFPETHQGT
GRGDTFNHNTSVIRTPAREDSSSTRGSSSSSSSSSSTRITTSSSGVSISHEPALRPALPK
ETVPLDPRCVLVLDQGTCRDYNIRWYYDKQANACAQFWYGGCNGNRNRFDTEEDCKRACV
IA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggtcccctcgctgcacttgctcctgctactatcgggacttccaggtctttgggcacag
gaacacaaagaagactatgaggtagagaagaagaagagcagactaagtccatccaattcc
acaccgcaaaatggcaaatcgctcataagcgaagattgcaatttggagttagcctttctg
atcgacagctcagagagcgccaaggacaaccatgcccaggagaagcgcttcgcctcggac
gtgatggagcgcctgcagaacctccggctgcagacgggccggagcctcagctcccgggca
gccctccttcagtacagcagccatgtcatcatagagcagaccttcaagcagtggaggggc
atcgatgacttcaaggcccgaattgctcccattgtgtacatcggtcacggcacctacacc
accttcgccatcaccaacctcacccgtatttacctggaggagtcggaccccaacagcatc
aaggtggccgttctgctcttcgatggcatctcgcaccccaggaacccagacatattttca
gctgtggctgacgccaagaaccagggcgtccgcttcttcaccgtcggcatcacacctgaa
gccaacgcggccgccaatatagctgagctgcggctaattgctagctccccagcctcgcgc
taccttcacaacctgcaggacagaggcgttgtggataaattcatcaaagagattacggcg
cttgcggatgaagggtgtcctctcgcccagagcaagtgtgcgtgcgacaagggtgagagg
ggagccagcggccctcctggcaagaagggtcgttctggagaagatggtagccccggctca
agaggagccaagggtgagggcgggctcagtggacttccgggtcgggatggaacagaggga
aagtcgggatacaaaggagagaagggagagagaggggagtgtggcacacctggaattaag
ggagacagaggtcctgaaggtaccattggtccgagaggaaaccgtggacttcagggtatg
cttggtccacctggtgatattggacctgaaggtacaatgggtaaaaaaggggaaagggga
ctttctgggccacctggaatccaaggggaaacagggctcggccttccgggacccaagggg
gatgttggttaccaagggcaaacagggccccatggtcctccaggacttggcgagcatgga
ctaccggggcctcaagggccacagggagtccaaggagagagaggacagataggagaaggt
ctccctggaccaaagggagagcgaggcttggacgggccgcgggggctcagaggacagccg
ggcgccggaatcaaaggagacaagggggattttgggcctcccggtcttccagggccgctc
ggcctcccaggagcaggcatacagggcgagaagggcgttgaaggaccaagggggccacca
gggggcagaggccaacaaggagagggctttcctggatccaagggggaccaaggtttgcca
ggcgaggttggctccccaggagaaaggggggccggagaccctggagctaagggcgagcca
gggtcaacggggctctctggtttgccgggtctgccgggggaggacggagcccccggacag
aagggtgagccaggacctgtaggtctcagggggtcagagggggcacctggaatcggcacc
cagggggaaaagggcgaccaaggccaaagaggaataaggggcttgacgggtccacctggc
attgccggaccctccggaccaaagggagaaccaggttcacaaggaagggggggtttaccc
ggtccaccgggccgcttcgtctccgggcccaagggggattttggcccaagtggtcctcct
ggtccgattggcgagactggctacggacttcctggtccaaagggggaccgtggaaattct
ggccctgcaggtccattcggttccaaaggagacggctaccccggccccatgggccctcct
ggtctgcccggacttccaggggaacccggccaggaaggactgggcatcgccggaccaaag
ggggatgttggtttccgagggctccctggtttaccgggacctccgggcgaaggcctccaa
ggacctctgggtaaccctgggcgacctggccctccagggccaacagggccacaaggacaa
ggagtccaaggaccaaagggggaacaggggtcccagggcgtgacggggccacgggggatt
cccggagaaggttttcctggagctaaaggggaccgcggctcgtcgggagagaaggggctg
aagggaatcaaaggagattttggagattctggaaccccggggcaacctggccgatctggg
gtcaaaggtgaagcgggcctcactagagaggacatcatacggatgatcaaagagatctgc
ggatgtgggatcaagtgtaaggagaggcccatggagctggtgttcgtcattgacagttca
gagagcgtgggcccggagaactttgagatcatcaaggactttgtaaacgcactggtggac
cgggtcacggtgggccgcaacgccacccgtattggcctggtgttgtacagcctggaggtg
aggctggtgttcaacctggcccgctacgtcaacaagcaggacatcaagcaggccatcagg
aacatcccatacatgggagagggcacctacactggcacggccatccgtaaagccactcag
gaggccttctacagctcgcgcgttggggtcagcaaagtggccatcgtgattaccgatggg
cagacggacaagcgagagcccgtgaagctggacatcgctgtacgagaagcgcacgctgcc
aacattgagatgtttgccctggggattgtgaacacctcagacccaacgcaggccgagttc
agaagagagctcaatctgatcgcctctgacccggacagcgagcacatgttcctcattgat
gacttcaacaccctgccagcgctggaatccaagctggtcagccagttctgtgaggacgag
aacggagccctgatatacaacagaataaataacggcaacgggaacaacggcaacagaaat
ggcaactacgccgtcggtggctacgggtaccagcccgcgacggagcagcaagtactgacc
ggcaccagcactcagagccacgaaggccgggtcgagaccaccctgcacggcagcatagga
tccagcacaggacaaggaggaagagggcagctcttgttccccgagacacatcagggaacc
gggcgcggggacacatttaaccacaacacctcagtcatcagaactcctgccagagaggac
tcctccagtacgcgaggctcctcctcctcatcttcatcttcttcttctacaagaattacc
acatcatcctcaggtgtctccatatcgcacgagcctgcactgaggccagctctccctaaa
gagaccgtacccttggacccccgatgcgtcctggtcctggaccagggcacgtgtcgggac
tataacatccgctggtactacgacaagcaggccaacgcctgcgcccagttctggtacgga
ggctgcaacggcaacaggaaccgcttcgacacggaggaggattgcaagagggcgtgtgtg
atcgcctga
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