Cyclopterus lumpus (lumpfish): 117746212
Help
Entry
117746212 CDS
T09199
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117746212 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117746212 (rpap2)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117746212 (rpap2)
Protein phosphatases and associated proteins [BR:
clum01009
]
HAD phosphatases
Fcp/Scp phosphatases
117746212 (rpap2)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117746212 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
117746212
NCBI-ProteinID:
XP_034411073
Ensembl:
ENSCLMG00005015659
LinkDB
All DBs
Position
17:17051177..17060010
Genome browser
AA seq
714 aa
AA seq
DB search
METETRRRSGGSDNTSKKGAKRDEEEARRRGVVRETLGERFDLEKRAMKVVERLLEDCVA
EDFLVDCAWFIAPANYKDTIEERSISKLCGYPLCSNKLGKIPTQMYKISTKTNKVYDITE
RKVNSATSGFKKVNIICIYIRLNIKMCACLSCEKSFCSNFCYKASKQFELQISNTPLWLR
VHESPPEIILMKKGDGGSSGEEVLLLERGLQEEDVENPLAAQSLDPHSSQQGSAVAGLSH
SESSDIEQEQDFVSSVVSQRQGPKVHWGNLPKRTDEDKENGHRMEKEKKQRRGGDEKEIE
AHRSHGADGERKMREDKNRQESFSCKTEVGTDAKKRLHSSNTDKLNGEHVPEERGLPDEP
SVEEATARLNLIYLSQTVTPPPVDSTAKQTENTNLLTPPKGPNGSTESIHFPSSTLINTN
QDGHDTALTSQPGLNITQVGMSRRGAAGLRELLKNHTAAPKPNSIRLNLIECLTRTLKDW
STDETLKFLYGADQSLCSPFVSVKEEKEVGGEEEELDEDDLEDEGTNEGAGVQKRPSAAA
PDYHVLQQETQQLELRVREFYKGTWILPEEVEEPHGSKMTKDPAMPLVDSRAQHLIQKRI
TVEKLTSCLRNIVGPLRLTMSDFSTDLNNLVRTFRFTNKNILHKTPEWTLLAVVLLHLLS
EVSPVVREALEMPTSVEYLNTLMEELGLQEQDLLNIVQLFKTLTHTHTQPDMDM
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgagaccagaaggaggagcggaggctccgataacacctctaaaaaaggtgcg
aaacgcgatgaagaagaagcaagaaggagaggggtcgtgagggagacgttaggggagagg
tttgatctggagaaaagagccatgaaggtagtggagcgtctcctggaggactgtgtggct
gaagacttcctggttgactgtgcatggttcattgctcctgctaattacaaagacactatc
gaggagagatcgatttctaaactgtgtggttatcctttatgttcaaataaacttggcaag
atcccaactcaaatgtataaaatttctactaagaccaacaaggtgtatgacataacagag
cgtaaggtaaacagtgcaacgtctggatttaaaaaagtaaatattatatgcatttatata
agattaaacattaaaatgtgtgcatgtctctcttgtgaaaagagtttttgtagtaacttt
tgctacaaagcctccaaacagtttgagctccaaatctcgaatacacctctttggctcagg
gtgcacgagagtcctccagaaattatattgatgaagaaaggagatggcggcagttctggt
gaggaggtgctgctgttggagaggggtctccaagaagaggatgtcgagaaccctcttgct
gctcaatccctggaccctcacagctctcagcagggttctgctgtggccggactcagccac
agtgaaagcagcgacattgaacaggagcaggactttgtctccagcgtggtttcccagcgg
cagggacctaaggtgcactggggcaacctgcctaaacgtacagatgaagacaaggaaaat
ggtcataggatggagaaggaaaagaaacagaggaggggtggcgatgaaaaggagattgag
gctcatcgaagtcacggcgcagatggggagcgaaaaatgagagaagataagaatagacaa
gagtcattttcttgtaaaacagaagttggaactgatgctaaaaaacgtctgcactcatca
aatacagataaacttaatggagagcatgtgccagaggagagaggcctgcctgacgaaccc
agtgtggaagaggctaccgctaggctgaatttgatctatttatctcagacggtcactccc
ccgcctgttgactcaacagccaaacaaacagaaaacaccaatctactcactccacccaaa
ggcccaaacggctcaacagaaagcatacatttcccatcttcaactctgatcaacacgaat
caggatggtcacgacacggcattgaccagccagccaggccttaacatcacacaggtaggt
atgagcaggaggggggcagcagggctgcgagaactactcaagaaccacacggctgcaccc
aaacccaactccatccggctgaatctcatcgagtgcctgacgagaacgttaaaggactgg
agcacagacgagaccctgaagttcctgtacggtgctgaccagtcgctctgctcgcctttt
gttagtgtaaaagaagaaaaagaggtggggggggaagaggaggagctcgatgaagacgac
cttgaagatgaggggaccaatgagggtgctggggtgcagaagagaccgtctgccgcagct
ccagactaccatgtgctgcagcaagagacccagcagctggagctacgagtcagagagttt
tataagggaacctggattctacccgaagaggtggaggagccgcatggaagcaagatgaca
aaggacccagcgatgccgcttgttgactctcgtgctcagcacctcatccagaaacgaatc
acagtggagaaactcactagctgtctcagaaacatcgtcggtcctctgcgtctcaccatg
agcgacttctccactgacctgaacaacctggtcaggacattcaggttcactaacaaaaac
atcctccacaaaactccagagtggaccctcctagcagtcgtgcttctccatctcttgtct
gaggtgtctccggtggtacgagaagccttggagatgccaacatcagtggagtatttgaac
acactgatggaagagctcggtctacaggagcaggaccttctgaacatagtccagctgttt
aaaaccctgacacacacacacacacagccagacatggacatgtga
DBGET
integrated database retrieval system
