KEGG   Cyclopterus lumpus (lumpfish): 117746241
Entry
117746241         CDS       T09199                                 
Name
(RefSeq) ras-related protein Rab-11B
  KO
K07905  Ras-related protein Rab-11B
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117746241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117746241
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117746241
   04031 GTP-binding proteins [BR:clum04031]
    117746241
Membrane trafficking [BR:clum04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    117746241
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117746241
  Exosomal proteins of other body fluids (saliva and urine)
   117746241
  Exosomal proteins of colorectal cancer cells
   117746241
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    117746241
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP AAA_16 ABC_tran AAA_14 Gtr1_RagA Csa3_N NTPase_1 FeoB_N TniB AAA_24 DUF3289 Septin YtzH AAA_21 FAD-SLDH
Other DBs
NCBI-GeneID: 117746241
NCBI-ProteinID: XP_034411152
Ensembl: ENSCLMG00005009159
UniProt: A0A8C2XGE6
LinkDB
Position
17:complement(11000540..11005003)
AA seq 218 aa
MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
IAERSAHDESPGNNVVDISVPPTTDGQRGSKLQCCQNL
NT seq 657 nt   +upstreamnt  +downstreamnt
atggggaaccgagacgatgaatacgatttcttgttcaaagttgtgttaattggggattcg
ggcgttgggaagagcaacctactctctcggttcaccagaaatgagttcaacctcgagagt
aagagtaccattggggtggagtttgccacgcgcagcattcaggtggacggcaagacgata
aaggctcagatctgggatacagcaggacaggagcgctacagagccatcacctcggcatac
tacagaggagcggtgggggcgctcttagtgtatgacatagccaaacacctgacctatgag
aatgtggagcgctggctgaaggagctgagagaccacgcagacaacaacattgttatcatg
ctggttggcaacaagagcgacctgcgccacctcagggccgtgcccacagatgaggcccgg
gccttcgcagagaagaacaatctgtcattcatagaaacttcagccttggactcaacaaac
gttgaagaagccttcaagaatatcctcacagaaatctaccgcatcgtctcgcagaaacag
attgctgagcggtctgcccatgacgagtccccaggaaacaacgtggtggacatcagcgtg
ccacccaccacggacggccagagggggagcaaattgcagtgctgtcagaacctgtaa

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