Cyclopterus lumpus (lumpfish): 117746242
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Entry
117746242 CDS
T09199
Symbol
serbp1b
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117746242 (serbp1b)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117746242 (serbp1b)
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Gene cluster
GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
SrfA
Motif
Other DBs
NCBI-GeneID:
117746242
NCBI-ProteinID:
XP_034411153
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All DBs
Position
17:complement(16221384..16229440)
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AA seq
431 aa
AA seq
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MPGHLQEGFGCVVTNRFDQLLDDESDPFEILKAAENKKKEGAAAGSAKSAAQAAKQPKKE
SQKDRKNPLLDKKEESQAPVPLKKEGIRRVGRRPDQQGQPGSQNQGGQGDGRPGDKRPDR
RPPRERRFEKPAEDKPEGGGEFSADKPSGDRPPRGRGGGRGGRGGRGRGMGRGEGFDSRG
KRDFDRHNGNDKPSQKSEEKRSGSGSHNWGTVKEEVSEAEQTAAPETTPEGEENAPAGSE
NKLSRENEVEEVKNEGPKEMTLDEWKAMQDKERTKVEFNIRKPNEGADSQWKKGYVLHKS
KSEDRPVGALIDVAEPEAEPTPVFNKQLGSPDESIDHHFRKPANDITSQLEINFGDLGRP
GRGRGGARGGRGGRGGGGGGGGGGGGGGGGGGGSGGGGGGSRPARGGGRPEKASGVSVPN
VDDPEAFPALA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacacctgcaagaaggcttcggctgcgtcgtaaccaaccggttcgaccagtta
ttggacgacgagtccgacccgttcgagatcctgaaagcggctgaaaacaagaagaaggag
ggggccgccgctggctccgccaagtccgcggctcaagccgccaagcagccgaagaaggag
tcacagaaggaccgaaagaacccgctgctggacaagaaggaggagtcccaggctccggtt
ccactgaagaaagaaggtatcaggcgagtgggccgaagaccagatcagcagggccagcct
ggttcccagaatcagggtgggcagggtgacgggcgacctggagacaagaggccagaccgg
agacctcctcgcgagcgccgtttcgagaagccggctgaggacaagcctgagggaggtgga
gagttctctgcagacaagccttctggagatcggcccccgagagggcgtggtggcggacga
ggtggccgtggtggaagagggcggggcatgggccgaggtgaaggctttgactcccgtggg
aaacgagactttgacagacacaacggcaatgacaaacccagtcagaaaagtgaggaaaag
cgcagcggcagcggctcacacaactggggcaccgtgaaggaggaagtgagtgaggctgaa
cagactgctgctccagaaacgaccccagagggagaggaaaatgcacctgccggctctgag
aacaagctttccagggagaacgaggttgaagaagttaaaaacgaaggccccaaagagatg
accctggacgagtggaaggccatgcaggacaaggagcgcaccaaggtggagttcaacatc
cgtaagcccaacgagggagccgacagccagtggaagaaaggatacgtgctgcacaagtcc
aagagtgaagataggcctgttggtgctttgatcgacgtcgcagagccggaagcagagccg
acccccgtgttcaacaagcagctgggcagcccggatgagtccattgaccaccacttccgc
aaaccagccaacgacatcacatctcagctggagatcaactttggagacctgggccgccct
ggacgtgggcgcgggggagctcgcggtggcaggggaggccgcggcggcggaggcggtggt
ggtggtggtggtggtggcggcggtggtggtggtggtggtagtggaggcggcgggggaggc
agcaggccagcacgcggcggaggacggcccgaaaaggctagtggagtgtcagtccccaat
gtggatgatcctgaggcctttccagccctggcctaa
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