Cyclopterus lumpus (lumpfish): 117746345
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Entry
117746345 CDS
T09199
Name
(RefSeq) excitatory amino acid transporter 1-like
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117746345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117746345
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
117746345
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Gene cluster
GFIT
Motif
Pfam:
SDF
Coa3_cc
Motif
Other DBs
NCBI-GeneID:
117746345
NCBI-ProteinID:
XP_034411298
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Position
17:complement(12837705..12845289)
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AA seq
516 aa
AA seq
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MGSVLYCLEEILLSEMMPSLNDLSELDSVEVTEPQETQTYVKCNKPSGHVSPQNASNVVA
FLMRNAFVVFTLAAVALGIGTGFALRHINMSAKDVKYLTFPGEILMRLLQMLVLPLIISS
VIAGISSVDMMAFGKIVLKAFSYYMVTTFIATFTGIALAVHIQPGKSSWTASVPSSGNAE
AVQTVDSFLDIIRNMNPSNLVEACFRKYKTVYSRSVTVTNENNDTVPGPGTLDGVNILGL
LFFSVAFGLILGRMENEAKPLRDFFDCLNKSIMHLVNIVIWYSPVGLFFLLAGQIVKVTD
SEEIGRRVFMYALTVTTGLLIHSLLTLPLIYFIVTRKNPFRFMLGLLQALTTAFGTSSSS
AALPITLYCMEGIHNMNKQVTRFMLPIGATMNMDGAALYEAVAALFIAQINNMDFNLGQI
IVLSLIVTVASTGAAGIPQAGMVSMILVLDSAGLPTEDISLLMIVDWILDRLRTTTNVLG
DCVGVSVVQHLSTKELQHSSPADTSFEEDSSQMRTL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgtgttatactgtttggaggaaatactcttgtcagagatgatgccaagcctt
aatgacctgtctgagttggactcagtagaggttacagaaccccaggaaacccaaacatac
gtcaaatgtaataagccctcaggtcatgtatctccccagaatgcatctaatgttgtggct
tttctcatgagaaatgcttttgttgttttcacattggctgctgtcgcattagggattggc
acaggctttgcattacgccacattaatatgtcagccaaggatgtaaaatatttaaccttt
cctggagagatcctgatgagactcctgcagatgttggtgcttcctctcatcatttctagt
gtgattgcaggtatttcatctgtggacatgatggcttttggtaaaattgtgctaaaggcc
ttcagctattacatggtcaccacctttattgctacattcactggcatcgccttagctgtt
catattcaaccagggaaatcatcctggactgcctcagtgccctctagtggtaatgcagag
gctgtgcagactgtggattcctttctagatataatcagaaacatgaatccctcaaatttg
gtggaagcttgtttcagaaagtacaaaacagtttattccaggagtgtgacagtgaccaat
gaaaacaatgacacagtaccagggccaggaaccttagacggagtcaatattttgggtcta
ctgtttttttctgtcgcctttggcctcatcttgggcagaatggagaatgaagcaaaacct
ctgagggatttctttgactgcctgaataaatccattatgcatctggtcaacatagtcatc
tggtattccccagtggggctcttcttcctattggcgggacagattgtgaaggtgacagac
tccgaagagataggtcgcagagttttcatgtacgctctcactgtaaccactggcctccta
atccacagcctcctcacccttcccctcatctatttcattgtcacacgaaagaatccattc
agatttatgctcggtctactccaggctctgaccactgcctttgggacttcgtcaagttct
gcagccctacctattaccctctactgtatggagggaattcacaacatgaacaaacaagtg
acacgcttcatgctccctattggggccacaatgaacatggatggtgcagcactctatgaa
gctgtagctgcattattcattgcccagattaataatatggactttaacctgggtcaaatc
attgtcctcagtttgattgtcacagttgcaagcactggtgcagcgggcatcccacaggcc
ggcatggtatccatgatacttgtgttggactcagctggattgcccactgaagatatatca
ctgctcatgatagttgattggattctggatcgtctacggactaccaccaatgtgctgggt
gactgtgtcggtgtgagtgtagtgcagcatctgtccacaaaggagctgcagcactccagc
cctgcagatacaagttttgaggaggacagctcccagatgcgcaccctgtga
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