Cyclopterus lumpus (lumpfish): 117746358 Help Entry 117746358         CDS       T09199                                  Symbol tpra Name (RefSeq) nucleoprotein TPR isoform X1   KO K09291   nucleoprotein TPR Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:clum00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     117746358 (tpra)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:clum03019]     117746358 (tpra) Messenger RNA biogenesis [BR:clum03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      117746358 (tpra) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_MLP1_2 Motif Other DBs NCBI-GeneID:  117746358 NCBI-ProteinID:  XP_034411319 LinkDB All DBs Position 17:246013..274173 Genome browser AA seq 2558 aa AA seqDB search MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEELGTQHERFKADSEQQYFDIDKR LAESQEQILSATRDMQTLKEDNRKLNEELSTLKGIEGETPEDKPPQQQTKAKYEIEAEKR ELARLLEKKMQEVENLTGDVKRLNEKLAETSKVKTELQLKLDGIQSSEASVQHREKRMEQ EKELHEKKIEWLTAELKTKTEELLTTTREKGMEILELQGLQKNSKEQVIRMEGQLASLKQ TSESHYKRAEDLNNKWKQAKDEQSAMEEKYRNELNANLKLSSLYKGAATDTETKNQELSR AVEELSKLVKDTGEANKTLDKKVSDGAELKTRLEAELQEKITKMETELENTTVKASGKHC CAPSLTEEQLDSMCPSAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVTRVLDE IVLEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKDKEEAKQRCDGMERE KLRTERHLEDTSTQVCALLVELEEARGSQVTKEDGSSANISSTSEVIRPHPLSFRSVEEL QRQNQSLLRRLRELEEEKDRRQSQMTSARVSELEASVDKLQKEVEQLREQRNQQKQLADS SARQRDMYKALLTQSTGFSLPPQAGSDSSSHPTPVKPSLPATRSTPQRAAAAESAQNTQA KAALKQLSDAFMLYKKEKAENDRMLNETNDRLQRQLTDLRSSHAKLTSQLEFSSKRYEML QETVTAYRREISALQDRNQKMAATTQRHEHIIHTMSQDLRQANEKLALEEVRVENLTKER DMLRRAESRLGREKEAMLAEQRNQNLLLTNLKSIQLTMERTETQAHQRLNDKIEHLEAEV ASMKTRLDQEVAQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRGAEQQVAALKAQL ASASSSEAAVTASGNNTTTTPAFRAAALRAPLRVRSPVPAAYQQLSQSEQELAEVKGLLR TAEEQKGELAEQLKNANASVEQYSAVVLTLEDSLKKEKESRCPLELRLKESEEVQNQLDK RILEGEKMKQQEREERRKAMDAVEKQVCELQRSLKSSQAEQQEALERATAAVTLEQKAIQ DSLLQTKLAGEAQAKYERELMLHAADVEALQELKKRSQQDAARRRELEEQLSKTSSLLQE RTTALNTAERQLKEDLTNKTRRCAELGKQNTLLHQQMDEMATRSRQQQQQQQLDLSFSEE GKTTEQILEILRFVRRDKEIAMAQCEASDGEASRYKQRVEHQDRELKELQETLNAEREKM QATAKTLAQQEEQLKKMEIIGTLQETTRILKMDRDKLEQELQQAQAKVAKLQSDISPLHH SLSMLSEKNGSMQADKRILEEDLKRWKAKTQQLVSQQKDGDVEERQKLSTEREAQQRRIT QLAEETGKLKAELARTSVSSNSAQSQLQGFRDSVARLTSERDTLKKDIETKNKDILEKNK TITQVKKIGRRYKTQYDELKAQHDKLVEETAAKAGSEAAPSQEVQQEVTKAQEERKKTVE ELSALKEEARKKLEEAQKMQQELEEAKKEIQQSKEKFQEVQNQLMQKQNQLTQVHSQLSQ IQTQLQQNQNQLTQSQKELQQAKTHSLQVHNQLKSAQSQSQARQNQIQQIQRELQQAKEA LQQNLTNQKEVQQTHQSSQQSHNQEVSNLKTALSQAESKMTELQGHLDSQQKLVGEREAD IKRLQEQLTEANQANEASRAVPANQSQSSQSNQSGTANAASDANAASDSNQALQEEELSK LRQELSESKNTEEQLRKQIAEKEEKTKKVFMGAKTKINQLNSAKERLSQEIAEVKQSKEE LEVRMNALKSQYEGRLLRLDRELRELRETHAHPEPREEPQDQSGAKVRDMKVSDQARSAD QRQISLKSPAQDRASSSMSDPPTANIRPTTSTPSPSSKPSPSPGSKATPRASIRPMVTEA TVPIPTPTATVMPTTQSDSQEALMSSGASVHSTSSGLVNTSINQPTSTQATAFVQPTQQQ AANQDTGMQVERPSTSSSLSATAGSKRGREEGVMEEKSSRPESSHTPPIPKKLRLKPTMA LQMEGDEDIEGELRDEGERQDSPDDSQILRNGFGLQELPEDCFPALAEEDEDIEEEGVSQ SVPSELMSSQGSAFVRDVIVIDTDSESHESKEGEEQQEDDGEEEDEEEEEEEEQDDDDDG YKEEEEEEGDEDEDDAGHSGMREGEEESREAEEEEGEPSGASNPDETACGASSDSQRPPE ASHRNEGCSGPTSESDAPRDHVHFPLTPSAPSHSPSSLTPRLPHPRRPPHPLPPRLYIQP PAPELGPPHTQRQSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDG FAEAIHSPQVAGLSTRFRFGPPEDLLPQTSASHSDLGQLASQGAVCEGLGMYESPLFLAA HDEDGGGRSVPTTPLQVAAPVTVFTESLPSDGADNMASQSVPMVTTSTGMASAADDGDEV FMEQEGEGPGIESSLESHTDIESTEPQSDDASLASTSQDPDTSSATQRRTGPSLMSILPT RGTRGGRGGRGEARTMLSRRGTFFRGGRGGAMGRGGFA NT seq 7677 nt NT seq  +upstreamnt  +downstreamnt atggcggccgtgctgctgcaggtcctggagcggacagagttgaataagctcccgaagggc gcccagaacaagctcgagaagtttgtaacggagctgcaaaatgctaacgaggagctcggg acgcagcacgagcggttcaaagcggacagcgagcaacagtactttgacattgacaagaga ctggcggagagtcaggaacagatcctgtctgccaccagggacatgcagacgctcaaggag gacaataggaaactcaacgaagagctgagcactctgaagggaatagagggagagacccct gaagataaaccaccacaacagcaaaccaaggccaagtatgagatcgaggcagagaagaga gagctggcgaggctgctggagaagaaaatgcaggaggtggaaaacctcactggggatgtg aagcgtctgaatgagaagctggcagagaccagcaaagtgaagacagagctgcagctcaaa ctggacggcatacagtcatctgaggcttctgtgcagcaccgggagaagcgcatggagcag gagaaagagttgcacgagaagaagatcgagtggctgactgcagaactgaagaccaaaacg gaagaactgttgaccaccaccagggagaaaggcatggagatcctggaacttcaggggctt cagaagaacagcaaggagcaggtgatcagaatggaaggacagctggcctctctgaagcaa accagtgaaagccactataaaagagctgaggacctcaacaacaaatggaaacaggctaaa gacgagcagagtgccatggaggagaaataccgcaatgagctcaacgctaacctcaagctg tcttccctatataagggggcagcaaccgacacagagacgaagaatcaagaactgagcaga gccgtggaagagctcagcaagctggttaaagacactggggaagccaataagaccctggac aagaaggtgtcagatggggcggaactaaagacacggcttgaggcggagcttcaagagaag atcacgaaaatggagactgagctggaaaacaccacggtgaaagcttctggcaaacactgc tgtgcgccctctctgaccgaggagcagctggactccatgtgtccgtcggcggctgccatc gctgccattgtcaagcctggcatgaagttctttgatctgtataacgcctacgcggagtgt cagacgcagcttcagctcgagaagcaggagaccaggagggtgacccgagttctggatgag atcgtcctggaggtcgagtccaaggcccctgtcctcaagcgtcagagagaggagtacgag agcatgcagagatccatggcctcgctgtgcaacaagctggaacaggctcgaacggagatc tacagtttgcagaaagataaagaagaggccaagcagcgctgtgatggcatggagagagag aaactgaggacagagagacatctagaggatacatctactcaggtgtgtgctcttctggtg gagctggaggaggccaggggcagtcaggtgaccaaggaggacggcagctccgccaacatt tccagcacctctgaggtcatcaggccgcacccgctgtccttccgcagtgtggaggagctg cagaggcagaaccaaagcctgctgagacggctgagagagctggaggaggaaaaggacaga cgacagagccaaatgacatctgcgcgagtttcagagttggaggccagcgtggacaagctg cagaaggaggtggagcagctgagggagcagaggaaccagcagaaacagctggccgactcc agcgccagacagagggacatgtacaaggccctgctgacacagagcaccggcttcagcctg cctcctcaagcaggttccgattcgtcatcccaccctacacctgttaaaccgtcgttgccg gctactcgctccactcctcagagagccgctgctgctgagtcggcacagaacactcaggcc aaggctgcattaaaacagctgagcgacgccttcatgttgtacaagaaggagaaggcggag aacgacaggatgttgaacgaaacgaacgaccggctgcagaggcagctgacggatctccgc tccagccacgccaagctcacctcgcagctcgagttcagcagcaagaggtacgagatgctc caggagactgtgacagcctaccgcagggagatctccgccctgcaggacaggaaccaaaag atggctgcaacaacccaacgacacgagcacatcatccacacgatgagccaggacctgcgg caggccaacgagaagctggcactggaagaggtgcgcgtagagaacttgaccaaagagaga gacatgctgagacgagcagagagtcgacttgggcgagagaaggaagccatgctggctgag caacggaaccagaacctgctgctcaccaacctcaagtccatacagttgaccatggagcgg acggagactcaggctcaccagcggctgaacgacaagatcgagcacctggaggcagaagtg gcttcaatgaagaccaggctggaccaggaagtggcacagagacacgcccttgggcgcacc atggacgcccagttgttggaagcgaagaaacagctggagacccagaacaccttgcagcag aagaccagagagctgctgcgcggtgctgaacagcaggtggcagctctgaaggcccagctg gcttccgcttcatcctctgaggccgccgtcaccgcctccggcaacaacaccaccaccacc ccagctttcagagccgcagccctccgagcaccactccgagtgcgctctccagtgccggca gcttaccagcagctcagccaatcggagcaggagctagcagaggtgaaaggcctcctgcgt accgccgaggaacaaaagggagaactggcagagcagctgaagaacgctaacgcctccgtg gagcagtacagcgctgtggtactgactctggaggacagtctgaagaaagaaaaggagtcc cgctgccctctggagctccggctgaaggagtccgaggaggtgcagaatcagctggacaag aggattttagagggggagaaaatgaagcagcaggagcgagaggagaggaggaaggccatg gacgcagtggaaaaacaggtgtgtgagctgcagcgcagtctgaagtccagccaggcggag cagcaggaagcgctggagagagctaccgctgctgtcacactggagcagaaggccatacag gacagcctgctgcagacgaagctagctggagaggcgcaggccaagtatgagcgggagctc atgcttcatgccgcagatgtggaggccctgcaggagctgaagaaaagatcccagcaagat gcagcgcggaggagggagctggaggagcagctgagcaagacctcatccctcctgcaggag agaaccacggccttgaacacagcggagagacagctgaaggaggatctgaccaacaagacc cgtcgctgtgcggagctggggaagcagaacactctcctgcaccaacagatggatgaaatg gccaccaggagtcggcagcagcagcagcagcagcagctggatctgtcgttcagtgaagag gggaagaccactgagcagatactagaaatactcaggtttgtgcggcgtgataaagagatt gccatggctcagtgcgaggcgtccgacggagaagcgtctcgctacaaacagcgagtggag caccaagacagagaactgaaggagctgcaggaaaccctgaacgccgagagggagaaaatg caggctacagccaagactctggcccagcaggaggagcagctgaagaagatggagattatc ggtactctgcaagaaaccaccaggatcctgaaaatggaccgagataaactggaacaggag ctccagcaagctcaggctaaagtcgctaagctccagtcggacatcagcccactacatcac tctctgtccatgctgtctgagaaaaatggctccatgcaggccgataagagaatactggag gaagacctgaaacgctggaaggccaaaacacagcaactggtcagccagcagaaagacggc gatgttgaggagcgacagaaactctccaccgagagagaagctcagcagagacgcatcaca cagctcgctgaggagacgggcaagctgaaggcggaactggccagaaccagcgtcagcagt aactcggctcagtctcagctgcagggcttcagagactctgtggcccgtctgacgtccgag agagacactctgaagaaagacatagaaacaaagaacaaggacattctggagaagaacaag accatcacccaggtcaagaagatcggacggcgctacaagactcagtatgacgagctcaaa gcccagcacgacaagctggttgaagaaacggctgctaaagcaggaagtgaggcggcaccg agccaggaggtgcagcaggaagtgactaaagcccaggaggagcgcaaaaagaccgtagag gagctcagcgcactgaaggaggaggcgcggaaaaagctggaggaggcccagaagatgcag caggagctggaggaggccaagaaggaaatccagcagagcaaggaaaagttccaggaggtc caaaaccagctcatgcagaaacagaaccagctgacgcaggtccattcccagttgtcccag atccagactcaactgcaacagaatcagaaccagctgacccaaagtcagaaggagcttcag caagctaagactcacagcttgcaggtacataaccagctgaaatcagctcagtctcaatcc caggcccgtcagaaccagatccaacagatccagagggagctccagcaggctaaagaggcc cttcagcagaacctcaccaaccagaaggaggttcagcagacccaccagagcagtcagcag agccacaaccaggaagtcagcaacctcaagactgctcttagccaagcagagagcaagatg actgagcttcagggacacctggacagccagcagaagctggttggcgagcgtgaggcagac atcaagcgtctgcaggagcagctaacggaggctaaccaggccaatgaagccagccgtgcc gtgccggccaaccagagccagagttcccagtccaaccagtccggcactgctaacgctgct agcgacgctaacgctgctagtgactctaaccaggcgctccaagaggaggagctgtcaaaa ctcagacaagagctgtctgagagcaagaacacagaggagcagctcagaaagcagatcgct gaaaaagaggagaagactaagaaggtctttatgggagccaagaccaaaatcaaccaacta aacagtgctaaggagcggctgagtcaggagatagcggaggtgaaacagagcaaagaggag ctggaggtgagaatgaacgccctcaagtctcagtacgaaggacgacttcttcggctggac cgagagctgagggagctgagagagacccacgcacatccggagccccgagaggagccacag gaccagagtggagctaaggtgcgggacatgaaggtcagtgatcaggccagatctgcagac cagagacagatctctctgaagagtcctgcccaggacagagcaagctccagcatgtctgac cctcccactgccaacatccgccccaccacaagcactccgtctccgagcagcaagcctagc ccctcccctgggagcaaggccacaccccgggccagcatccggccaatggttaccgaggca accgtccccatcccaacacctaccgccaccgtcatgccgaccacacagagtgacagccaa gaggcgctgatgagctcaggagcctctgtacactccaccagctccggtctggtgaacacg tcgataaatcagccaaccagcacccaggccacggcttttgtccagcccactcagcagcag gcagccaatcaggacacaggcatgcaggtggagcgaccgtccacgtcgtcctccctgagc gcaacagccggttcaaagcgaggcagagaggaaggggtcatggaagagaagagttccaga ccagagagttcacacacacctccgatcccaaaaaaactacgactaaaaccaacgatggca ctgcagatggaaggcgatgaggacattgaaggggagctgagggatgagggagaacgacag gactcaccagacgacagtcagattctcagaaacgggtttgggctgcaggaacttcccgag gattgtttccccgcgttagccgaagaggacgaggacatcgaggaagaaggcgtgtcccag tctgtcccctctgagctgatgtcctctcagggctccgccttcgttcgggacgtcatcgtg atcgacacggacagcgagagtcacgagagcaaagagggggaggagcagcaagaggacgac ggtgaagaggaagatgaggaggaggaggaggaggaagaacaagacgacgatgacgacggg tataaggaggaggaagaggaggagggcgatgaagacgaggatgatgctggccacagcggg atgagggaaggagaggaggagagcagggaggcagaagaagaagagggcgagccgtcggga gcctccaaccccgatgagactgcgtgcggagcgtcctccgactcgcagcgtccccctgag gcgtcacacaggaacgagggctgcagtggccccacgtcagagtccgacgcccccagagac cacgtacacttccccctaaccccctctgctccctcccactccccctcctccctcactccc cgcctcccccacccacgtaggcccccgcatcccctcccaccacggctctacatccaaccg ccggctccggagctgggacccccgcacacacagagacagtcctcccagctgcgcagacca tcagtaggacgtggccctcagctgacccctggaataggcagcatgcaacatttctttgat gatgacgacagaatggttcccagtactccaactctggtggtcccacaccgcaccgatggc tttgctgaggctatacattctcctcaggtggcaggtctgtccaccaggttcaggtttggg ccgccagaagacctgctgcctcagacatcagcctcacactctgacctgggacagctggcc tctcaaggagctgtgtgtgaaggtctggggatgtacgagtcccctctgttcctggctgct cacgatgaagacggaggaggaaggagtgtccccaccacaccgttacaggtggcggcacca gtgacggtcttcacggagtccttgccctcagatggtgccgacaacatggcgtcccagtcg gttcccatggtaaccacctccaccgggatggcttctgctgcagatgatggagatgaagtc ttcatggagcaggagggagagggtcctggtattgaatcctctttggagagccacacagac attgagtcgacagaaccgcagagtgatgatgcatcactggcatctaccagccaggaccct gacaccagcagcgccactcagcggcgcaccgggcccagtctgatgagcatcctgccgacc agaggaaccagggggggcagaggggggaggggggaggccaggacgatgctcagccgcaga ggcactttctttcggggaggaaggggaggagccatgggcagagggggcttcgcctga

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