Cyclopterus lumpus (lumpfish): 117746391
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Entry
117746391 CDS
T09199
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117746391
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117746391
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
DSRM_2
Dicer_dsRBD
GHMP_kinases_N
Motif
Other DBs
NCBI-GeneID:
117746391
NCBI-ProteinID:
XP_034411371
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All DBs
Position
17:complement(19095974..19105943)
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AA seq
681 aa
AA seq
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MGTSSLEVKENRDDKIQVDCDLLRKYHPSAFCTTFPKHGPRALKRKQPLVDGKDRLLHQS
YSTCKRAAWAIARKNALVQLNELRPGLRYEILSKTGPLHAPVFSVGVEVNGFHFEGRGPT
KKQAKMRAAELALRSFIQFPNASQAHAAMGSLTSTVDFTADIPDSFLREFELRESCDLLH
CNTAKKELFSSVYNHRRLVRLTLDFSSSHPKRLLEQLSPVALLNELRPGLRYMCLTERVH
GRTMRSFIMVVRLEGRVYEGCGHSKSSAKAQAATAALQSIYNVSLGPERKVTSLQHQLPQ
FFAESIFHLVGEKYSELTDGCSSTSSTSSYGHHKVLAAVVMTRGFDLRSAQVVSLATGTK
CLDSDNAGDRGGTLSDCHAEVLSRRALVRFLYAQLELLLCEPTHCEEQSIFAPNKGAGGG
GGFRLRDAVLFHMYVSSSPCGDARLNCPYETTAAYPSRKFHGHLRVKVDGGEGTLPITAR
RANQNRGGVSAGKALVTMSCTDKMAKWSVVGLQGALLSHLVEPVYLHSLTVGTLSHTGHL
GRALERRLAPVKRLPFPYRRQQLLLGCLSSSEVRPAGKAPNVSGNWSRGDGGLEEISTST
GRRKDSGTPSRLCRRSMFARWQTLQQQLNGAGATQGTYSGSKMAAGRYQRAMLQFTSALQ
GGGLGTWLRKLPELGHFNVSV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaagcagtttggaggtgaaagagaaccgggatgataaaatccaggtggattgt
gacctgctacgaaagtatcatccatcagcgttttgcacgactttccccaaacacggaccg
agagctctgaagaggaagcagccgctggtggatggaaaagaccggctgctccaccaaagc
tactcgacctgtaaaagagcagcctgggctatcgctcggaagaacgcgctggtgcagctg
aacgagttacggcccggtctgcggtacgagatcctgtcaaaaaccggcccactgcatgct
ccggtgttctccgtaggcgtcgaggtaaacggcttccacttcgagggccgaggaccaacg
aagaagcaggccaagatgagggctgcagaactggccctccggtcgtttatccagttcccg
aatgcctcccaggctcacgccgcgatggggagcctcaccagcactgtcgattttactgcg
gacatccccgactctttcctcagagaatttgagctgcgtgaaagctgtgatcttctgcac
tgcaacacagcgaaaaaagagttgttttccagcgtttacaaccacagacgacttgtacga
ctcacactggacttctcctcgagtcatccaaaaagacttttagagcaactcagcccggtg
gcgctgctcaatgagctgcgaccgggtctcaggtacatgtgcctgacggagagggttcac
ggcaggacaatgaggagtttcatcatggtggtccggttggaggggagggtgtatgaaggg
tgtggtcacagtaaaagttcggccaaggcccaggctgccacggccgccctgcaatctatt
tataacgtgagtctgggaccagagaggaaagtcacgagtctccaacatcagctacctcag
ttcttcgcagagtcgatcttccacctggttggagagaaatactccgagctgacagacggc
tgctcctctacctcctctacctcctcgtacggccatcacaaagtcctggcagcagtcgta
atgaccagaggttttgacctcaggtcagcgcaggttgtgtcactggccacggggaccaag
tgtctggactcggacaacgctggcgaccgtggcggtacgcttagcgactgccatgccgaa
gtcctcagccggagggcgctagttcgattcctgtatgcccagctggagctgctgctctgt
gagccaacacactgtgaggaacaatccatctttgcaccaaataaaggcgctggcggcggc
ggcggcttccggctgcgggacgccgtcctcttccacatgtacgtcagctcgtcgccatgt
ggagacgctcgactcaactgcccctacgagaccacagctgcatatcccagcaggaagttc
cacggtcacctcagggtgaaggtggacggaggagaggggacgctgcccatcacagcgcga
agagccaatcagaaccggggcggtgtgtcggcgggcaaagctctcgtcaccatgtcctgc
actgacaagatggcaaagtggagcgttgtgggcctccagggggctctcctgtctcacctg
gtggagccggtttacctgcacagcctgactgtggggacgctcagccacacgggtcacctg
ggccgggccttggaacgccgcctcgcgcccgtcaagcgcctgcccttcccttacagacgg
cagcagctgctgctcggctgtctgagcagcagcgaggttcggccggcgggcaaggcgccg
aacgtcagcgggaactggagccggggtgacggaggcctggaggagatcagcacctccacg
gggaggaggaaggactcggggacgccatcgcgactctgcaggcgctccatgttcgcccga
tggcaaacgctgcaacagcagttgaacggcgcaggagcaacacaagggacatattcaggt
tccaagatggctgctggacgctaccaacgggcgatgctgcagttcaccagcgcactgcag
ggcggagggctgggaacttggctcagaaaactgccagaattgggtcacttcaacgtcagt
gtgtga
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