Cyclopterus lumpus (lumpfish): 117746403
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Entry
117746403 CDS
T09199
Name
(RefSeq) rho GTPase-activating protein 12-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117746403
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117746403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
SH3_1
PH
SH3_10
SH3_2
Motif
Other DBs
NCBI-GeneID:
117746403
NCBI-ProteinID:
XP_034411383
Ensembl:
ENSCLMG00005017785
LinkDB
All DBs
Position
17:17367927..17414468
Genome browser
AA seq
931 aa
AA seq
DB search
MAELPIAPGEVYIEVEYDYEYKAKDRTITIHQGECYMLVKKSNDDWWQVRKEEGTKAFYV
PAQYVREVRKALMPPPKPSAASGHSPPQSGGALWVKPTSLDLGLQGRSTENLHRHESNYR
RSPSAHTASSGHFSPPSLRRDSNHHLPPGSPIDHDRALADILVQAGGPQPPQKGGSSTLP
RTRARSPELERAPLDVDSAHHCDSAGEERRTNDSESGDELSSSSTEHPQTVSSSGHGRSE
SPVYTNLQELKISQTSLPPFPSGSSLHVMGDWETFKDQNGRHFYYNRSTQERTWKPPRAK
DASTGSSRGEFQSAGESSETTPLSLSPSFFPFLSLSIGRLQPLSSEDTCFSAYSSQSDSQ
YGSPPRGWSEETDAHGHTLYVSDHTNEKWLKHVDEQGRPYYYSADGSRSEWELPKYNNSP
PQPPGDALKSYSLDRKQVEPIVLTKWRHSAYVQDANDKRLLKTRRFRAGSARQHPYKHQD
APLSPKPSSPDSDSCPPSPKPPASPSEKCGLLNVTKITEHGKKVRKNWTSSWTVLQGSTL
LFAKGQGGGTSWPFNLSGSFPEFVLSLLSNWRPSTKKRPAVSYGCSRLDRASSFGGGQSK
PEFTVDLRGSSVEWASKDKSSKKHVLEVKTRQGTELLIQSDNDGLVNDWYRTLLDTISTH
AWESDEAIEEDLPESPGAEKHDKEKEHRDSKKSRAMKTSTSMDASDNKKTRHKLKKFLTR
RPTLQAVRDKGYIKDQVFGCSLSSLCHRESDTVPIFVKMCIDHVENTALCVDGLYRVSGN
LAIIQKLRFVVNHDETVNLADEKWEDIHVTTGALKMYFRELPEPLFTYALFHDFVSGIKI
PDYKQRVQSIKDLIRQLPKPNHDTMQALFKHLRRVIEHGEENRMTTQSVAIVFGPTLLRP
ETETWNIAVHMVYQNQIVELILLEYENIFGR
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgcctattgccccgggcgaggtctacatcgaggtggagtacgactacgaa
tacaaggccaaggaccgcaccatcaccatccaccagggagagtgctacatgctggtcaag
aaatccaatgatgactggtggcaggtgaggaaggaggaagggactaaggcgttctacgta
cctgctcagtatgtccgcgaggtgcgcaaagccctcatgccccctcccaaaccttctgct
gcctccggccactcacctccgcaaagtgggggcgcgctctgggtaaagccaaccagtctg
gacctgggactccaaggccggtccacggagaatcttcacagacacgagtccaactatcgg
cggtcgccctccgcacacacggcgtcctcagggcatttcagcccccccagtctgcgcagg
gacagcaaccatcatctcccccccggcagtcccatcgaccacgaccgagcgctggcggat
atccttgtccaggccgggggcccccaacctcctcaaaaaggagggtccagcaccctccca
cgcacccgagcaagatccccggagctggagcgagccccgctggatgtggacagcgcccac
cactgtgactccgcgggcgaagagaggcgcaccaacgactcggagtcgggggacgaactg
agcagcagctccactgaacatccccagacggtgtcgtcgtcgggccacggccgctccgag
tcgcccgtctacaccaacctccaggaactgaagatcagccagaccagcctgccccctttc
ccctccggctcctccctccacgtgatgggcgactgggagaccttcaaggaccagaacggc
aggcacttctactacaaccggtccacccaggagaggacctggaagcccccgcgagccaag
gacgccagcaccgggagctccagaggagagttccaaagcgcaggggagagctccgagacc
actcctctgtcgctctcgccgtctttcttccccttcctctcgctctccatcggtcgcctc
cagcctctgtcgtcggaggacacctgcttcagtgcctactccagccaatcggacagccag
tatggctcgccaccgcgcggttggtcggaggagacggacgcccacggccacacgctgtac
gtcagcgaccatactaacgagaagtggttaaaacacgtcgatgagcagggcagaccgtat
tactacagtgcagatgggtcgaggtcagaatgggagctgccaaagtacaacaactccccc
ccacagccgcctggagacgctctaaagagctacagtctggacaggaaacaggttgagccc
atcgtcctcaccaagtggaggcacagcgcctacgtccaggacgccaacgacaagcggctg
ttaaaaacccggcgtttccgcgcaggctcggcccgccagcacccgtacaaacaccaagac
gctcctctgagccccaagccctcatctcccgactctgactcctgccctccgtctcccaag
ccccccgcctctccgtctgaaaagtgtggccttctgaatgtgacaaagatcaccgagcac
ggcaagaaagtacggaagaactggacgtcttcctggaccgtgcttcaaggatccacgctg
ctatttgccaaaggccaaggaggcgggaccagctggccattcaacctcagtgggtccttc
cctgaatttgtcctctcactgttgagtaactggaggccgtccactaagaaacgccccgcc
gtctcctatggctgctccaggctcgacagagcctcctcttttggaggcggtcagtccaaa
ccagagttcactgtggatctgaggggcagctcggtggaatgggcttccaaggacaaatcc
agcaagaagcatgttctagaggtgaagactcgacagggcacggagctgctgatccagtca
gacaacgacggcttggtcaacgactggtaccggacgctgctggacaccatcagcacccat
gcctgggagtctgacgaggcgatagaggaggacctgccggagtcgcctggtgcggagaaa
cacgacaaggagaaagaacacagagactcaaagaaaagccgagccatgaagacctccacc
agcatggacgcctccgacaacaagaagaccagacacaagctgaagaagttcctgacccgc
cgtccgaccctgcaggccgtccgggacaagggatacatcaaagatcaggtgttcggctgc
agtctgtccagtttgtgccacagggagagcgacacggtgccgatctttgtcaagatgtgc
atcgaccacgtggagaacaccgctctgtgtgtcgatgggctgtacagagttagcgggaac
ctggcgatcatacaaaaacttcgcttcgttgtcaaccacgatgagacggtgaacttggcg
gacgagaaatgggaggacatccacgtgaccaccggcgctttaaagatgtacttcagggag
ctgccggagcctctcttcacctacgccctcttccatgactttgtcagcggcatcaagatt
ccagactacaagcagcgagttcagtccatcaaggatctgatccgacagctgcccaaaccc
aaccacgacaccatgcaggctctcttcaaacacctcaggagggtgatcgaacacggcgag
gaaaaccgcatgaccacccagagcgtggccatcgtgttcggccccacgctgctgcggccg
gaaacggagacctggaacatcgcggtccacatggtgtaccagaaccagatagtggagcta
atactgctggagtacgagaacattttcggcaggtag
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