Cyclopterus lumpus (lumpfish): 117746424
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Entry
117746424 CDS
T09199
Symbol
lamc2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04382
Cornified envelope formation
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117746424 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117746424 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117746424 (lamc2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
AAA_13
MG280
COG3_N
AAA_15
YwqH-like
Prefoldin_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
117746424
NCBI-ProteinID:
XP_034411425
Ensembl:
ENSCLMG00005012850
LinkDB
All DBs
Position
17:22813038..22832706
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AA seq
1134 aa
AA seq
DB search
MRSGWTSLFVLLVAALVAVQAAYTHYTHYATVRCDCNGRSRYCLRDAQGLHCVDCQGNTA
GRHCERCKDGFHLAGAALSCTPCRCNLTGSVNATCDSRGRCSCKERVTGDKCDRCLDGPI
GPNGCSQSRRPREDSGSQMCFCYGHSSKCSAQSSYSVHSITSTFADGPDGWKAATAQGIT
PDDVHFRWSPTHHDLEVISKNSLPVYLFAPAPYLGNQLLSYGQNFSFSLRLDRGVRHPST
NDVVLEGAGLRAAASLGDLRSIVPCGQKRNYSFRLDEQPGSRWRPQLSASQFQTLLQNLT
AIKIRGTFGENGRGYLANVRLVTARRADGTPARWVQTCSCPPGYEGEFCEQCSDGFRRRT
PADGAFSPCEPCSCRGGSCDPQTGDCYSADETPGELSCSKGFYRDPWPPRTCVKCPCPEG
VTCSLAAGSLAPRCDRCPTGTTGPRCNVCQEGFYGVPPRGDATQQTCRSCQCNGHIDVDM
EGSCDRSSGECLKCLNNTMGLSCEACMPGFYRGPAAAATAACKPCDCDLRGSESRRCEDG
GRCRCRPGYEGLRCQRSDCPACFSPIKTKMEAYGGKLKELKTLFSDTDAGLKPAGRGQIE
AALRATEELVDDLQYDTELLAGLEKNLQGRLASISRSQLAEGRVLQDVGDVADDVKRKQQ
TYKTKVEEVQGLMEEMKRKLDEAKANLRSAEIPLGDAPSGSNLLSSLEQTANSLADKHQA
KADAVQRSANEALSDSEKSLALVRSLMNKENKVKELIGDLKATYDKASAQVKGLENQATR
LSGEARDESSMADGMLKDIASMGRNIPLSLKGQVDAMVSRLDGVNQAVDGDISDLKALQD
GVQRDKAATGDLLEMGKVAQKGFNELLDRVNMAKADTESVLQRIHSNTDELDNALDTLRG
FDQQIDGGKASADAAIKRLPGIAAAVKQAVGDNAKTASVLGDRSSDYAEALGSINVLQDL
VHGLEGALGSGPSHAGLLKEATELNREVQDLKTQAADAAQDVDLELDASRTLEADAGQAA
ERAAETLDGARRTGDAVGRTLRDIRGLLANMNQTGAVDEAQLQRLEASVADAQRGVAGLR
PRLRAVEQLEADRRRQLSGVQRDVFSILRDIENLEEILGAVPKGCYNSLPVEKP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcggctggacttccctcttcgttctgcttgtggcggcgcttgttgccgtgcag
gccgcctacacacactacacacactacgcaacagtgcgctgtgactgcaatggcagatct
cggtactgcctccgggacgcccagggcctccactgcgtcgactgccagggaaacactgcg
ggccgccactgcgagcgctgcaaggacggcttccacctggcaggggcagcactgagctgc
acaccctgccgctgcaacctcaccggttctgtcaatgccacatgtgacagcagggggcgc
tgcagctgtaaagaaagagtcacaggagataaatgtgaccgctgcctagacggaccgatc
ggaccaaacggctgctcgcaaagccgtcggcccagagaggattctgggagtcagatgtgt
ttctgttacggtcacagcagcaaatgttctgcacaatccagttactccgttcacagcatc
acctccaccttcgccgacggtccggatggctggaaggcggcgacggcacaaggcatcacc
cccgacgacgttcacttccgctggtcaccaacacaccacgacctggaggtgatctccaaa
aacagcctccccgtttacctgttcgctccagctccttacctggggaaccagctgctgagt
tacggtcagaacttttccttctcattgcgtctggaccgcggcgtccgacacccgtccacc
aacgacgtggttctggaaggagccggcctccgagcagccgcctcgctgggcgacctgcga
tccatcgtcccctgtggacagaaaagaaactacagtttcagactggatgagcagcccggc
agcaggtggaggcctcagctctcagcctcacagttccagacgctcctccagaacctcacc
gccatcaagatccggggaacatttggcgaaaatggacgcggatatctcgccaatgtgcgg
ctggtgacggcgcggcgggccgatggcaccccggcccgttgggttcagacatgcagctgc
ccgccgggttacgagggcgagttctgcgagcaatgctcagatggcttcaggcgcagaacc
cccgcggacggcgccttcagcccttgtgagccttgcagctgcagaggaggcagctgcgac
ccgcagacgggcgactgctactccgccgacgagacgcccggagagctcagctgctccaag
ggcttctaccgcgacccctggccgcctcgcacctgtgtgaagtgcccctgtccggagggg
gtgacctgctcgctggctgccggttcactggcgccccgatgtgaccgctgtccaaccgga
accacaggtcctcgctgtaacgtctgtcaggaggggttctatggcgtgcctcctcgtggc
gacgccacccagcagacctgccggtcttgccagtgtaacggacacatcgacgtcgacatg
gagggaagctgcgatcgcagcagcggcgaatgtctgaagtgtctgaacaacacgatgggg
ctgagctgcgaggcctgcatgccgggtttctaccgcggacccgccgccgccgccaccgct
gcctgcaaaccgtgtgactgcgaccttcggggctctgagtccagacggtgtgaagacggg
ggtcgctgtcggtgcagaccgggctacgagggtctgaggtgccagaggtccgactgtccc
gcctgtttcagccccatcaagacaaagatggaggcgtacggcggcaagctgaaggagctg
aagactctgttctcagacacggacgcaggtttgaaaccagccggcaggggccagatagaa
gccgctctgagggccaccgaggagctggtggacgacctgcagtacgacacggagctgctg
gcaggcctggagaagaacctgcagggccgcctggcgtccatcagcaggagccagctggcc
gagggccgggtcctccaggacgtcggcgacgtggcggacgacgtcaaacgaaaacagcag
acgtacaagacgaaggtggaggaggttcagggtctgatggaggagatgaaacgcaagctg
gacgaggccaaggccaacctcagatcagccgagattcctcttggagacgctccgtcgggg
tccaacctcctctcttctctggagcagacggccaacagtctggctgacaaacatcaggcg
aaggcggacgctgtgcagcggagcgccaacgaagctctgagcgactcggagaagagtctg
gctctggtccgatccctcatgaacaaagagaacaaagtcaaggagctgataggagatctc
aaagccacgtatgacaaggcctcggcccaggtgaagggtttggagaaccaggcgacccgg
ctgagcggcgaggcccgagacgagagcagcatggcggacggcatgctgaaagacatcgcc
agcatggggcgaaacatcccgttgtccctgaagggacaggtggacgccatggtttccagg
ttggacggcgtgaatcaggcggtggacggggacatttcagacttgaaggcgctgcaggac
ggcgtgcagcgagacaaggccgccactggggacttgctggaaatgggcaaggttgcccag
aagggtttcaacgagctgctggacagagtcaacatggccaaggccgacacggagagcgtt
ctgcaacgtatccatagcaacaccgatgagctggacaacgccctagacaccctgagaggc
ttcgaccagcagatcgatggtggcaaagcttcggcggacgccgccatcaagcgcctcccc
ggcatcgccgccgccgtcaagcaggccgtgggcgacaacgccaagacggcctccgtgctg
ggagaccggtcctcagactacgccgaggcgctgggaagcatcaatgtgctgcaggacctg
gtccacggtctggagggtgcactgggctctgggccgtctcacgctggtctgctgaaggaa
gccaccgagctgaaccgggaggtccaggacctgaagacacaggcggcggacgcagctcaa
gacgtggacctggagctggacgccagcaggacgctggaggccgacgccgggcaggcggcc
gagcgagcggcggaaactctggacggcgccagaagaaccggagacgccgtggggagaacc
ctgagggacatccggggcctgctggccaacatgaaccagactggggcggtggacgaggct
cagctgcagcgcctggaggcctctgtggccgacgcccagaggggcgtggccggcctgagg
cctcgtctgagggccgtggagcagctggaggccgaccggcggcgccagctgagcggcgtc
cagcgggacgtcttcagcatcctgagagacatcgagaacctggaggagatcttgggggcc
gtccccaagggctgctacaacagcctccccgtggagaagccctga
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