Cyclopterus lumpus (lumpfish): 117746500
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Entry
117746500 CDS
T09199
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117746500 (chd7)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117746500 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
117746500
NCBI-ProteinID:
XP_034411567
Ensembl:
ENSCLMG00005015903
LinkDB
All DBs
Position
17:101523..168498
Genome browser
AA seq
3282 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDGLGDCFPQQPASAQSNPLAQQTNPSLNHEHQGTRGYHQ
GMIHSAVPGPGQPKLAQIYDHGPYTGYDQPGAPGGRMMAQNGPSQGPPNVNTAMNGMASH
YHNNSANSSNPLHGYPGDAGGGGSGGGVWGQQPQTQQQPQQTRSAYQQPPAQPGGGPNQM
GAYQMSQGNYGGMQVPPTPNAARMNQHYPSQSMVPPPAQDPSHYLGHVGMGGAQMRHPQP
QSQPQGYPNMGHTPRYPHSPSRQPPHPHQHQQGMGGFGGAQYPGYQAQYGAMGPGMGQGA
NSNVNANTSQAMGPAQLGQRFNQGSTPAAGPQGQRYPPGPPHQPLPTHSAPMQQAGQQGQ
PMHPQHPQSLPQPQNQPQSHLVPPAQGTYPSPSSMSPMRVLGTPTPPPQQGRPPSAGLTG
APEVAGYTALQSQPNAMAQRTPQIPLSAPQPQHQQPPSAGQMYTGLGPQRGSQMGPNRPQ
LQQGPLETPVCQGGDQRLLQAPQQAPRSGLPTPMGFQGPVVGQHGIPAPNQGLAPPAQSA
PVQHAHMSAQPHHLQSTPPPPNQASHPWAPPASHPLSSPPLTPQKVPHVQHSPTDPSGDA
SMMVPDRPTVGVGAPGQPISTEQPGDQETKPKKKRKKKAKVASGEKEEGGKKVARETPAA
AARGGEEDMKSEFPGTGSDAGERVTGKGTVEGSSPSVEEKKKRKKKPKEKVEGKEPKTPK
TPKTPKTPKEPKEKKTKSSTPKTKTPKKTSSKKVESDGGASAAKKESKRKREPSVSDDVE
VKSPPPSPPEEEDDDGVQKRRSSRQVKRKRYTEDLEFRISDDDDSGDDSPAPKSPSSSQQ
QDVAEAEGPVVEKIMSKRITKKQLESGEELEVEEFYVKFKGFSYLHCRWADLEELEKDKR
IHQKVKRFRAKQQLNSFITEMDDEPFNPDYVEVDRVLDISESPDENGETVTLYLVKWCSL
PYEDSTWELKADIDQSKIEEYERIAARTPNTTKVDRPPAADWKKLEGSMDYKNANALREY
QLEGLNWLTFNWYNSRNCILADEMGLGKTIQSITFLNEIYMKGMEGPFLVIAPLSTIPNW
EREFRTWTELNAVVYHGSQASRKTIQAYEMYYRDAQGKIIKGAYRFHALITTFEMILTDC
PELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFL
EPERFPSEPTFMTEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT
NIQKKYYRAILEKNFSFLSKGGTGGGGGGSGGGGPNVPNLLNTMMELRKCCNHPYLINGA
EEKIAEDFRDSHGGRADMPDMALQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCL
DILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGRENANSGVQPLSKKEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTIT
IESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDLDAINGRNTLVIDTPRVR
KQTRHFSSAKEDEMLEFSELESDEDEPSKPSSKPRRPQDKTQGYPRSECFRVEKNLLVYG
WGRWSDILAHGRFKRPLKEADVETICRALLAYCLLHYRGDENIKSFIWDLITPSADGTTK
TLTNHSGLSTPVPRGRKGKKGKPLAPPPQTPRADWLASCNPDHLLQEDSYKRHLKHHCNK
VLLRVRMLYYLRQEVIGDQADRILEGADSSELDIWIPQPFHAEVPTDWWDSEADKSLLIG
VFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGSDMMADGVEGEDEDPEYKPLRM
PFKDDMDDFTNSPLDDNVEGEAEAKSGENGQGVGGASSANERLYWPAASALTARLRRLIT
AYQRSNRREQLRQEALSRPDGRRRRRREFLPTIGMVTDAGGGGATYIQDGAAVFLTDGTQ
YLTKGGAYFAKSGQFLPEASPVMTASSLMTDGAMYYKERRQRWTRREEADFYRVVSTFGV
VFDTQCQKFDWAQFRAFARLDKKTDESLEKYYYSFIAMCKRVCRMQVKTETELPDPTLII
DPITEERASRTLYRIELLRRIREQVLPHPLLSERLKLCQSSPDLPEWWESGRHDRDLLLG
ASKHGVSRTDYHILNDTALAFLDAHQRFTGQRGANGSTAAPGEITKAGMGAAESNAAPLL
TATELASAAAAANIAVIAAKEEECSEGKEVKMETEQGDADDIPCIKTETVDEQKGIEGEV
GEMKEESAASPRNKAKKEGVEAHPKVEKEQKEEPIIGETTSKPADNQDKEKSSTPAASLR
DRTEATTELSEHPETSPKDLLGHKAAEQEHGEEREHPESPKSADTEKNLEEEEEEEEEEE
EEEEERMDEDDKSEKSSQAEASAASEQKNFDEESIASLSTSAQNETRDGFCPDDLPETSA
LQALQDRAYSFSFWPKDRVMINRMDNICDAVLKGKWPVNRRHIFDFPSNLLQGHGSAVAA
ATVSTVTESPLQRRSLPELTMAGIPTAYSGSEDKTLSPQVHEDALSLTAPRQRRRRRRKI
EIEAERAAKRRNLMEMVAQLRESHSATESQSQAIDLTKGMQHHHKASPSLAGFPSALVTT
PSLKAQMELLQQAPPSGQRANGSLEADLPIMRRRRGRRKNVEGLELLFMGNKRAGRDDVD
GTKVSSAEGVQDSTRAHRPLTVAEQSPSSRSLASGSLEEEEAAVSNKELGEWLRQHPTYT
MDMAGFTPKSEDLLSQFSKPKQKRHRCRNPNKIDINTLTGDERVPVVNRRNGRKMGGAMA
PPMKELPRWLLENPEYSIAPDWTDIVKQSGFLPEAMFDRLLTGPVVREEGVRRRGRRPKS
EIAKATVAAQAAAAAHAAQASLASAASSAGGINPLLLSSLFGGMDLSSLQSLQSLQLAAG
LMAFPHPSDPKQAAASMLPLMLPGMGGLPNMAAALPNMFSLGGLFGGNLATVAAAAAAAS
NSIAATSRNTNGTTEGEVGDSDEAVTSKKKGEGEDYEEGDDEEEEEEEAEGKGEGTKKSF
STGAPRLPAADSSAEVCINGDAAALLAAAGMSANSLAFNPFLLSTMAPGLLYPSMFLPPG
LGGLSLPGFPTAATLADLQNAMAGALGGNAVITNPPRDEDEEQEEDEEKAGLKASGEEEV
KGGGGKIDLEEDGAEETRGDYSAPEDAGEEEEEVENEEAACD
NT seq
9849 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagtttattcggggacgatgcagggctgttctcagatgga
ttggatggtttaggggactgctttcctcagcagcctgcctccgcccagtccaaccctttg
gcccagcagactaatccctctctgaaccacgagcaccagggaaccaggggctaccaccag
gggatgatccacagcgctgtgcccggccctgggcagcctaaattggcgcaaatctatgac
catggcccctacacaggctacgatcaacctggtgcccccggaggacgaatgatggcccag
aatggtcccagccaggggccaccaaacgtgaacacggccatgaatggcatggcttcccac
taccataataactcggctaactcgagcaaccctctccatgggtaccccggtgatgctggt
ggaggaggaagtgggggtggcgtttggggccagcagccgcaaacgcagcagcaaccgcag
cagaccagatcagcttatcagcagcctccggcacaaccagggggaggccccaaccagatg
ggagcctaccagatgtctcaaggcaactatggtgggatgcaagttccgcctacacccaat
gcagctcgcatgaaccaacactacccttcgcagagcatggtaccccctcctgctcaagac
ccatctcactacctgggacatgttggaatgggtggggctcagatgagacacccccagccc
cagtcacaaccccagggctatcccaatatgggccacaccccccgatacccacactccccc
tcccgacagcctccacacccccaccagcaccaacaaggcatgggagggtttgggggtgcc
cagtaccctggctatcaggcccagtatggcgccatgggacctgggatgggccagggtgcc
aattctaatgtcaatgctaacacaagccaggccatgggaccagcgcaactcggccagagg
tttaaccagggatcaaccccagcagctggaccgcaggggcagcgataccctcctggacca
ccacaccaaccccttccgacccattctgccccaatgcagcaggcagggcagcagggccag
cctatgcacccacaacaccctcagagtctgccccagccccaaaaccagccccaatcccac
ctcgtccccccagctcagggaacctacccctccccctcatccatgtcccccatgcgggtt
ttgggaaccccaacacctcctccccagcagggcagaccccctagcgcagggctaactgga
gccccagaggttgcagggtacacagccctgcagtctcaacccaatgctatggcccagaga
actccccaaatccccctgtctgctccacagccccagcaccagcagccccccagtgcaggg
cagatgtataccggcctggggccacagcggggttctcaaatggggccaaacaggcctcag
ctccagcaagggcctcttgaaactccagtctgccaggggggagaccagcgtctgctccag
gccccgcaacaggccccccgaagcgggctgcccactcccatgggtttccagggtccggtc
gtcggtcagcacggcatcccggccccaaaccagggcttggccccgcccgcccagagtgct
ccggtgcagcacgcacacatgtccgcccagccgcaccacctgcagagcacaccccctccc
cccaaccaggcctcccacccctgggcgcctcccgcctcccacccactctcctcaccccct
ctcaccccacagaaagtgcctcacgtacagcattcccccaccgacccatcaggcgacgcc
tcaatgatggttcctgacaggccgacggtcggggtcggcgcccccggccagccgatcagc
acagagcagcccggtgaccaggagaccaagccaaaaaagaaaaggaagaagaaagcaaaa
gtggcgagcggagagaaagaagagggagggaagaaggtagcgagagaaacgccggcagca
gcagccagaggcggagaggaagacatgaagtctgaatttcccggcacaggaagtgatgcg
ggtgagcgggtgactggcaaaggaactgtagagggaagttcgccgtcggtggaggagaag
aagaagcggaaaaagaaaccaaaggaaaaggtggagggcaaggagcccaagaccccgaag
acacccaaaacacccaagacccccaaagaacccaaggagaagaaaaccaagagctccacg
cccaagacaaagacccctaagaaaaccagcagtaagaaggttgagtccgacggcggagct
agcgctgctaagaaggaatccaagaggaaaagagagccgtcagtcagcgacgacgtggag
gtgaagtctccacccccctcgcctcctgaggaggaggacgatgacggtgtccagaagcgc
cgctccagccgccaggtgaagaggaaaaggtacacggaggatctggagttccggatctcg
gacgatgacgacagtggagacgactcgccggcacccaagtccccgtcgtcgtcacagcaa
caggacgtggccgaggcagaggggcccgtcgtggagaagatcatgagcaaacgcatcacc
aagaaacagctggagtcaggggaggaattggaggtggaggagttctacgtcaagttcaaa
ggcttttcgtacctccactgtcgctgggcagacctggaggagctggagaaggacaagaga
atacaccaaaaggtcaagaggttccgggccaagcagcaactcaacagcttcattacggag
atggacgacgagccttttaaccccgactacgtggaggtggaccgtgtcctggacatctca
gagagcccagatgaaaacggagagacggtgaccttgtatctggtgaaatggtgcagcctg
ccttacgaagactccacctgggagctgaaggccgacatcgaccagtccaagatagaggaa
tatgaacgcatcgcagcgcgcacacccaacactacgaaagtggatcggcctcctgcagcc
gactggaaaaagctggagggctccatggactacaagaacgccaacgcactcagggaatac
cagctcgaaggccttaactggctaaccttcaactggtacaactcacgtaactgtatcttg
gcggacgagatgggtctcggcaagaccatccagtccattacattcctcaacgagatttac
atgaagggtatggaggggccattcctggtcatcgccccgctctccaccatccctaactgg
gagagggagttcaggacctggaccgagctcaacgcggtggtctaccacgggagccaggcc
agccgcaagacgatccaggcctacgagatgtactacagagacgcacagggtaagataata
aagggagcgtaccggttccacgccttgataacgaccttcgagatgattctgaccgactgc
ccggagctccgcagcgtgccatggcgctgcgtggtgattgacgaagcccaccgcctcaaa
aaccgcaactgcaaactactggaaggactcaaaatgatggacatggagcacaaagttctg
ttgacgggaactcctctccagaacaccgtggaggagctcttcagcttactcaacttcctg
gagcccgagcggttcccgtccgaaccgacattcatgactgaattcggagaccttaagact
gaagaacaggttcaaaaactgcaggccattctgaagcccatgatgctgagaagactcaag
gaggacgtggagaagaacctggccccgaaggaggagaccatcatcgaggtggagctgacc
aacatccagaagaaatactacagggccattctggagaagaatttctccttcctgtcaaaa
ggaggcacaggagggggaggaggaggaagtggaggtggaggaccaaacgtccccaacctc
ctcaacaccatgatggagctgaggaaatgctgcaaccacccctacctcattaatggggcg
gaagagaaaatcgccgaggatttcagggactcccatggcggcagggcggacatgccggac
atggccctccaagccatgatccaggccgccggtaagctggtgctcatcgataagctgctg
cccaaactgaaggccggcggacaccgagtcctggtgttcagtcagatggtccgctgcctg
gacatcctggaggactacctcatccagaaacgatatccctacgaacggatagacggccga
gttcgcggcaacttgcggcaggcagccatcgaccgcttctccagacccgactcggaccgc
ttcgtcttcctgctgtgtacgagagctggaggactcggcatcaacctaacagcagcagac
acctgcatcatcttcgactccgactggaacccccagaatgacctgcaggcccaggccagg
tgccaccgcatcggccagtccaaggcggtgaagatctaccgtctgatcaccaggaacagc
tacgagagggagatgttcgacaaggccagtctgaagctgggcctggacaaggccgtcctc
caaagcatgagtggacgagagaacgccaacagtggggtccagccgttgtccaagaaggag
gtggaggacctgctgagaaagggagcgtacggggctctgatggacgaggaggatgagggc
tcgaaattctgcgaggaagacatcgaccagatcctccagagacgaacccacaccatcacc
attgagtccgagggcaagggctccactttcgccaaggccagctttgtcgcagcggggaac
cgaaccgacatttccctggaggatccggacttctggcagaaatgggccaagaaggccgag
cttgacctggatgccatcaatggacggaacacgctcgtgatcgacacaccaagggtgagg
aagcaaacgcggcacttcagtagcgccaaagaggacgagatgttggagttctccgagctg
gagagcgacgaggacgagccgagcaagccctcgtccaaaccccggcggccccaggacaaa
acccaggggtacccccggtccgagtgcttcagagtggagaagaacctgctggtctacggg
tggggcaggtggagcgacatcctggctcatggccgctttaagcgccccctgaaggaggct
gacgtggagacgatctgcagggccctgctggcctactgcctgctgcattaccgcggagat
gagaacatcaagagcttcatctgggacctgatcaccccaagtgcagacgggaccaccaag
acgctgaccaaccactccggtctctccactccagtccctaggggcaggaagggcaagaag
gggaagcccctggccccgcctccacagacaccgcgagctgattggctggccagctgcaac
ccggaccacttgctgcaagaggatagctacaagagacacctgaaacaccactgtaacaag
gtgttgctgcgcgtgaggatgctgtactacctgcgacaggaagtcatcggcgaccaggct
gatcgcatcttggaaggagctgactccagtgagctggacatctggattcctcagccgttc
cacgccgaggtcccgactgactggtgggacagcgaggccgacaaatcccttctcatcggc
gtcttcaaacacggctatgagaagtacaactcgatgcgagctgaccccgccctgtgtttc
ttggagagggtgggcatgcccgacgccaaggccatcgccgctgagcagaggggctccgac
atgatggcagatggcgttgagggcgaggatgaggatccagagtacaagccactgcggatg
cctttcaaagacgacatggacgacttcaccaactctccactagacgacaacgtggaaggt
gaagcggaagccaaatcgggtgagaacggtcaaggtgtgggcggagcctcgagcgccaac
gagcggctctactggccggcggcctcagctctcactgcccgcctgcgacgcctcatcacg
gcttaccagcgctccaaccgcagggagcagctccgccaggaggccctcagtcggcccgat
ggacggcggcggcggcgcagggagttcctgcccaccatcggcatggttaccgacgcgggg
ggaggaggggcgacttacatccaagatggagcggcggtcttcctgacggacggaacccag
tatctgactaaaggaggtgcctactttgccaaaagcggtcaattcctgccggaggcgtcg
ccggtgatgaccgccagctcgctgatgacggatggagcgatgtactacaaggagagacga
cagcgatggactcgccgcgaggaggccgatttctaccgcgtggtgtcaaccttcggagtc
gtctttgacacccagtgccagaaatttgactgggcgcagttcagggcctttgctcgactg
gacaagaaaacggacgagagcctagagaaatactactactcattcattgctatgtgtaaa
cgggtctgcaggatgcaggtcaagactgaaacggaactcccagacccaaccctgatcatc
gaccccatcacagaggaacgtgcctcccgcaccctgtaccgcatcgagctgctccggcgc
atccgggagcaggtcctcccccacccgctgctctcggagcgcctcaagctctgccagtcc
tctccggacctccccgagtggtgggagagcggccgccacgaccgggacctcctcctgggg
gcctccaagcacggtgtaagccggacagactaccacatcttgaacgataccgccctggcc
tttctggacgcccaccagcgcttcacaggccagcggggggccaacggcagcacagcggcc
ccgggtgagatcaccaaagcagggatgggagcggcagagagcaacgccgcgcccctcctc
accgccacggagctggctagtgctgcagcggctgccaacattgccgttatcgcagctaaa
gaggaggagtgcagcgaagggaaggaggtgaaaatggaaactgagcaaggagatgctgac
gacatcccatgtatcaagactgaaactgttgatgaacagaagggaattgagggagaggtc
ggagagatgaaagaggaaagcgctgcttcgccgagaaacaaggcgaagaaagagggagtg
gaggcccacccaaaagtggaaaaagagcagaaggaggagccgatcataggagagacaacc
tccaagccggcagacaaccaagacaaagagaagagctcgactcccgccgcctctctgagg
gaccggacggaggcaaccaccgagctctcggagcatccggagacctctcccaaagatcta
ctgggccacaaggctgcagagcaggagcatggggaggagagggagcatccagagtctcca
aagtcagctgacaccgagaaaaacctggaggaagaggaggaggaggaggaggaggaagag
gaggaggaggaggagaggatggatgaagatgacaaatcagagaaatcctctcaggctgaa
gcgagcgctgcgtccgagcagaagaactttgacgaggagagcattgcgtcgctgagcacg
tcggcccaaaacgaaaccagagatgggttctgccccgacgacctgccggagacctctgct
ctgcaggccttgcaggaccgcgcctactccttctcattctggcccaaggatcgagtgatg
atcaacaggatggataacatctgcgatgccgtcctgaagggcaagtggcccgtaaacagg
cgccacatcttcgatttccccagcaacctgttgcaagggcatggctctgccgttgccgct
gccaccgtctccacagttaccgagagcccactgcagaggcggagcctccccgagctgacg
atggccggcatccccaccgcttacagtgggagtgaagataaaacgctatcgccacaggtt
cacgaggacgctctgagtctgacggcacctcgccagaggaggaggaggaggaggaagatc
gagattgaggcggagagggcggccaagaggcgcaacctgatggagatggttgctcagctg
agagagagccactctgccaccgagtctcaaagccaggcgatagacctcaccaagggcatg
cagcatcaccacaaggcctctccctcattggccggcttccccagtgccctggtgaccacc
ccctccctcaaggcccagatggagttgctgcagcaagccccgccctctggacagagagcc
aatggttcgctggaggccgacctgcccatcatgaggaggaggcggggccgcaggaaaaat
gtggaaggcctggagctgctgttcatgggcaacaagcgagcaggaagggatgacgtcgat
gggacaaaggtctcgagtgcggagggggttcaggattctacccgggcccacagacccctc
accgtcgcagagcagagtcccagttccaggtctctggcctccggcagtctggaggaggaa
gaggcagcggtttcaaacaaagagctgggagagtggctaaggcagcacccaacatacacc
atggacatggctggattcacaccaaagagcgaggatttactgtctcagttctccaagccc
aagcagaagcgccaccgttgtcggaaccccaacaagatcgacatcaacaccctgaccgga
gacgagagagtgcctgtggtcaaccgacgcaacggacgcaagatgggcggggccatggct
ccaccaatgaaggagcttcccagatggttgctggagaacccagagtattctattgcccct
gattggacggacatcgtcaaacagtctggtttcctcccggaggccatgtttgaccgcctg
ttgaccggccctgtcgtcagggaggagggcgtccggcgtcgggggcgtcgaccgaaatct
gagatcgccaaagccaccgttgccgcccaggcagcagcggcggctcatgcagcccaggcg
tcactggcctcggccgcttcatctgcaggtggaatcaaccctctgctgttgagcagtctg
ttcggagggatggacctgtcgtccctgcagagcctccagtctctccagttggccgccggt
ctgatggcgttccctcacccctccgaccccaagcaggccgccgcctccatgctgcccctc
atgctgcccggtatgggaggcctgcccaacatggccgccgccctccccaacatgttcagc
ttaggcggcctgtttggcgggaaccttgcgacggtcgcagctgctgcagccgccgcatcg
aactccatcgccgccacgtcacggaacaccaacggaacaacggagggcgaggtaggagat
agtgacgaggcggtgacgtccaagaagaagggagaaggagaagactatgaagaaggggat
gacgaggaggaggaggaggaggaggctgaaggtaagggggaaggaacgaagaaatctttc
tccaccggagctcctcggctccctgcagccgattcatcggccgaggtgtgcatcaacggc
gatgctgcagcgctgctggctgcagctggcatgtcggccaactccttggcgttcaacccc
ttcctcctctccaccatggcccccggcctcctctacccctccatgttcctgcctccgggc
ctcgggggactcagcctgcccggcttccccaccgccgccaccctggccgacctgcagaac
gccatggccggagccttggggggcaacgccgtgatcacaaaccccccaagagacgaggac
gaggagcaagaggaggacgaggagaaggcggggctaaaagcttcaggagaggaagaggtg
aaggggggaggaggaaagattgacttggaggaggatggagcggaggagacgagaggcgac
tattcagccccggaggatgctggtgaggaggaggaggaggtggagaatgaggaagcagcg
tgtgactga
DBGET
integrated database retrieval system
