Cyclopterus lumpus (lumpfish): 117746542
Help
Entry
117746542 CDS
T09199
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117746542 (pif1)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117746542 (pif1)
Enzymes [BR:
clum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117746542 (pif1)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117746542 (pif1)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
117746542 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
Mg_chelatase
UvrD_C_2
DEAD
AAA_7
RsgA_GTPase
AAA_16
ABC_tran
AAA_5
PhoH
AAA_24
Motif
Other DBs
NCBI-GeneID:
117746542
NCBI-ProteinID:
XP_034411637
Ensembl:
ENSCLMG00005015514
LinkDB
All DBs
Position
17:11566649..11572957
Genome browser
AA seq
635 aa
AA seq
DB search
MLDGEDGAQLQCCVTVEHLNASGQATRRQVIRKASVILGRNEFQDIILRVHDAKVPQNYN
LKEFKLFTKFVREGKCTVKLLRENIQVLFSNCPPDRLNLFLKTLSIKHQARMSSKPMTDR
EKLKAGLPRSFEAISPLQQKDVEKVNELRSTVAPKGLTDRTNGTTVAGRGPQVKRSRSDT
NFSPVKANPSKKPILCLPSCKLNKEQAAVLTAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEVSMVEAQFFDKLESVARSVRRSTQPFGGIQLIICGDFLQLPPVSKGKEKASFCFQAKS
WRKVIQVNMELMEVRRQTDQSFISLLQAVRVGRVTEEITAKLMDSAYHPIERDGILATRL
CTHKDDVEFTNENKLQQLPGSVRVFEALDSDPALAKTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGLVVAFEPGKHGLPRVRFLCGATEVLKAERWVFKSCSGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRADP
DVLIFYKKLRKERLLMQASMDDFLGNGNQKTSVRW
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgttggacggggaggacggtgcccagctgcagtgctgtgtgacggtggagcacctgaac
gcctccggtcaggccacccggaggcaggtcatccgtaaagcctcggttattctgggccgg
aatgagttccaggacattatcctccgggtccatgacgcaaaagtcccgcaaaattacaat
cttaaagaattcaagctttttacaaagttcgtcagagaagggaagtgcaccgtcaaactg
ctccgcgaaaacatccaggtgctcttctccaactgcccccctgaccgactgaacctcttc
ctaaaaaccctgagcatcaagcaccaggcccgtatgagcagcaagccgatgaccgacaga
gagaagctcaaagccggtctgccccgcagctttgaggccatcagcccgctgcagcaaaag
gatgtcgagaaggtcaacgagctgaggagtacagtggcgcccaaagggctgaccgaccgc
accaacgggacaactgtagctggaagaggaccgcaggtcaaaaggtcgagaagtgacacg
aacttcagcccagtgaaagccaacccgagcaaaaagcccatcttgtgtctgccgtcatgt
aagctgaataaagaacaggccgctgtcctcactgctgtgctgagtggcaagaacgtcttc
tttactggaagtgcaggtacaggaaaatccttcttactgaagagaatcatgggatctctt
cctccaaaaagcacctttgccacagccagcacaggagtggctgcatgtcacatcggagga
acgacattacacaactttgctggtattggctctggctctgccccgctggagcagtgtatc
gagctggcccagaggcccggggtgctgcagcactggaccagctgtcgacacctcatcatc
gatgaggtctctatggtggaggcccagttctttgataagcttgagtcggtggcaaggtcg
gtgaggaggtccactcagccgtttgggggcattcaactgatcatatgtggcgacttcctc
cagctgcctcctgtttctaaaggaaaggaaaaagccagcttctgcttccaggccaagagt
tggcgtaaggtcatccaggtcaacatggagctaatggaagtgcggaggcaaactgaccag
tccttcatctccctcttacaggcagtgagggtgggcagggtgacggaggaaatcaccgcg
aagctgatggacagcgcctaccatcccattgagagggacggcattctagcgaccaggctg
tgcacacacaaggacgatgtggagttcacaaacgagaacaaactccagcagctgccaggg
tcagtgcgtgtgtttgaggccctggacagcgacccggccctggcgaagacaatcgacgct
cacagccccgttagcagactgatccaactcaaagttggagctcaggtcatgctgactaag
aacctggatgttgctcgaggtctggtgaacggagcgcgaggcctcgtggtggcttttgag
cctggaaaacatggactcccacgtgtgcgtttcctttgtggtgccacagaggtgctgaaa
gctgagcgctgggtatttaagtcttgcagtgggatccacctgagtcgacagcagctgcca
ctcaaactggcctgggccatctccatccacaagagccagggaatgacactggactgtgtg
gaaatctctttggcgcgtgtgtttgagagcggtcaggcctacgtggccttgtctcgggct
cgaagcctggagggtctgcgggtgatggactttgacccccgtgtggtcagggcagatcca
gatgttctcatcttctacaagaaactgaggaaagagaggctgctcatgcaggcctccatg
gatgactttcttggcaatggcaaccagaaaacatcagtgagatggtga
DBGET
integrated database retrieval system
