Cyclopterus lumpus (lumpfish): 117746571
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Entry
117746571 CDS
T09199
Symbol
ocel1
Name
(RefSeq) occludin/ELL domain-containing protein 1
KO
K17291
MARVEL domain-containing protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117746571 (ocel1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117746571 (ocel1)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
117746571 (ocel1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Motif
Other DBs
NCBI-GeneID:
117746571
NCBI-ProteinID:
XP_034411688
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Position
17:11381103..11387321
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AA seq
559 aa
AA seq
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MKSWSSKFKRQDPGSVAESSSSKMNSISGPPEPVWVTHTPTPDNITDDGDNSSTGRTSST
PPYAEKEDNKGSMKERLKTFIPQSWGGIIHKWTKESDSLNDSEASISKIQILPNGSRVSP
PVSPLRERRNCNESLGNSSQNSHRPLLRESPSDDILYEGLREESLLTSIHPAEYYAEKLE
VYNQKYSYLKSWPGLLRLLAGLQLLFGGMVFACIIAYIQKDSEWSNSYGLYNGAYNNGLG
MSGYSYRGPMTAFVLAIAGVSWIITLILLVLGMTMYYRTILLDAPWWPLTEAFINVALFL
FYMAAGIVYLNDLNRGGLCYTTIGVNPIMANLCRVDGGQMAGTAFIFINMAMYLGSFLVC
LKMWRHEAAQREKEYFENKEQFHQSIPLTTQKTKRISFKDEKDKSLSKDDLNQNAFISEV
HKNPVSVNRATVSEYTPKVHIIADYIIKYPGISCVEEKEKYKAVFNDQYQEYKDLHRDIG
ITLDKFRQLDAMMARLLRDGKSQEDQQRIQSVLKKYQRKKSDPGFLEKKERCDYLKAKLS
HIKNKIRIFDQEAMEDGRT
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctggagcagcaaattcaagagacaagaccctggcagtgtggctgagtcctcc
tctagcaagatgaactccattagtggcccaccggagcctgtgtgggttactcacacaccc
acaccagataatatcacagatgatggggataatagctccacaggccgaacctccagcact
ccaccgtatgctgagaaggaggacaataaaggcagtatgaaggaaagactgaaaaccttc
atccctcagtcatggggaggcatcatccataaatggacaaaggaaagtgacagtttaaat
gactctgaagccagcatcagtaagatccagatccttcccaatgggagcagggtgagtcct
cctgtaagtcccctgcgggagcgcaggaactgtaatgaatcacttggcaactccagccag
aactctcataggcctttgttaagggagagcccctctgatgatatcttgtatgagggccta
cgagaggaatctctcctgaccagtatccatcctgcagagtactacgctgagaagctggag
gtctataaccagaagtactcttatttaaaatcctggccagggttgctcagacttcttgcg
ggacttcagctcctttttggaggcatggtgtttgcctgcatcatcgcgtacatccagaaa
gacagcgagtggtccaacagctacggactctataacggtgcatataacaatgggctaggc
atgtctggatacagctataggggccccatgacggcctttgtactggctatagctggagtc
tcctggattataaccctcattcttttagtgctgggaatgacaatgtattatcgcactatc
ctccttgacgcaccgtggtggcctctgacggaggccttcatcaacgtggcgctgtttctg
ttctacatggcagccgggattgtctacctgaacgacttgaaccgtggggggctgtgctac
acaacaataggcgtcaaccctatcatggccaatctgtgccgggttgatgggggacagatg
gcgggaacggctttcatcttcatcaacatggcaatgtatctgggaagcttcctggtgtgt
ctgaagatgtggaggcatgaggctgcacaaagggagaaagagtactttgagaacaaggag
cagtttcaccagtccatcccactaaccactcaaaaaacaaagcgcatatcattcaaggat
gaaaaggataagtctctgagtaaagatgatctcaatcaaaatgccttcatctctgaggtg
cataagaacccagtcagtgtgaacagagccacagtgtctgaatacaccccaaaagtacac
atcatcgcagactacatcataaagtatccagggatcagctgtgtggaagaaaaggaaaaa
tacaaagcagtttttaatgaccagtatcaggaatacaaggacctccacagagacatcggc
atcaccctcgataagttcagacagctggatgccatgatggcacgactcctcagagatgga
aaaagccaagaggatcagcagaggattcaaagcgttttgaagaagtatcagcggaaaaaa
agtgaccccggcttcctcgagaaaaaggaacgatgtgactatttaaaagctaaattaagc
cacatcaaaaacaagatacgcatttttgaccaggaagccatggaagatggtcggacatga
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