Cyclopterus lumpus (lumpfish): 117746601
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Entry
117746601 CDS
T09199
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04148
Efferocytosis
clum04218
Cellular senescence
clum04310
Wnt signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117746601 (nfatc4)
04020 Calcium signaling pathway
117746601 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117746601 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
117746601 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117746601 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117746601 (nfatc4)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117746601 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
117746601
NCBI-ProteinID:
XP_034411739
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All DBs
Position
17:19339290..19351792
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AA seq
895 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPLSRQSQGPSPVRVAEPESSVPGEESECAPLHLESSS
STSLVTDNHHSISIPSTPPSANQRAGMHSPPPRRAPAREFSGTYESLPARSVQVSESRVV
ECPSIQITTISPEDDLAPTISSYWEMGGGGGWDRERLYLPLLDPFTYRDRCPSSLSPSPG
SSPSSRGWLSPASSCDSLLVEEEDLNEATVNFGLSPSSRPTSPGGKKRRNSPLVSPCTSR
RGSYSEELQGCNLEGRDSAPQSQAPPSSCELSIPQKTRKTSLEQLSSREVDQEQAPGHSS
PCPLPETQQTRREPPSLGMDYLSVPPALAWGRTRASAHSPLFRSNALPPLDWPLPSQFDQ
YELRIEVQPRPHHRAHYETEGSRGAVKATPNGHPIVKLCGYTERKPLSLQVYVGTADDRS
IRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGILKLRNSDIE
LRKGETDVGRKNTRVRLVFRTHLPLAPPAAQPGRVLALQVASLAIECSQRSAQELPVIES
VSLTSCSVEGGEELLLSGSNFLPISRVLFIERGTDGKLQWEEEAHVDRDNSNECLLCVRV
PAYSDLSVSRPTSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDTLLSRPSVLPLDQGTVCP
VGVQPSMDVGFPVRGDPMADDQGLGFHLPPYPSAYSPPCPTMGYHEEYCSKPDATAKEPR
AALSERHPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPF
PAGSPISTSPLPPIPTSPYPQYSAYPQDACPSPPSNPSPYQDMYPAPYSHYEGWDPQGRL
LGMGHGGDRDAKIQECPLEFTSSSMHHITFEEVTEYIGEDIQSFQSASHMDNQPN
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggagagttcgagttcaagttggtgttc
gaggaggacccgctgtcgcgccagagccaggggccatccccggtgcgcgtagccgagccg
gagagctccgttcccggggaggagagcgagtgcgccccgctgcacctggagtcctccagc
agcaccagcctggttacagacaaccaccactcaatcagcatccccagcacgccaccgtcg
gccaatcagcgggccgggatgcattccccgcctccgcggagggcccccgccagagagttc
agtgggacctatgagagcctgccggcgcgctctgtacaggtttcagagtcccgtgtggtc
gagtgtccaagcattcagataaccaccatctcccctgaagacgacctagcgccaaccatt
tccagttactgggagatgggtggcgggggtgggtgggatcgcgagcgcctctacctcccc
ctgctggaccccttcacctaccgcgacagatgccccagctccctcagccccagccccggc
tccagcccttcctcccgcggctggctcagccccgcctccagctgcgactccctgctggtg
gaggaggaggacctgaacgaggccacagtcaatttcgggctctcgccgtcctcgaggccc
acttctcccgggggtaaaaaacgtagaaactcccccctggtctccccctgtacttcacgg
aggggcagttactctgaagaactgcagggatgtaacctcgagggcagagactccgcccct
cagtcgcaagcgccgcccagcagctgcgagctcagcatcccacagaaaaccaggaagacg
tcattggaacagttgtcatccagggaggtggatcaggaacaggctccaggccacagctcc
ccctgcccgctgccagagacccagcagaccaggagagagcctccttcgctgggcatggac
tacctctctgtgcctcccgctctcgcctggggccggacccgagccagcgcccacagccct
ctattcaggtcgaatgccctgccgccactcgactggccgctgccgtcccagtttgaccag
tacgagctgcgtatcgaggtgcagccccgtccgcaccacagagcccactacgagacggag
gggagcaggggagctgtcaaggccacaccaaacggacatcctatcgtcaagctgtgtgga
tacactgagaggaagccgctctcccttcaagtttacgttggaacggctgacgaccgatca
atcaggccgcatcctttctatcagatacacagggtgacaggaaagatggtgggcactgcc
agtcacgagagcgtccaggcggggaccaaactgctcgacatccccctcaaccccgagaac
aacatgactgcactcatcgactgtgctggcatcctgaagctgaggaactcggacattgag
ctgaggaaaggagagacggacgttgggaggaagaacacgcgcgtccgcttggtgtttcgt
acccacctccctctagcgccccctgcagcccagcctggtcgagtcctggccctgcaggtg
gcctccctggccatcgaatgctcccaacgttcggctcaggagctgcccgtcatcgagtcc
gtcagtctgacctcctgctctgtggagggaggagaggagcttctgctgagcggctcgaac
ttcctgccaatctccagggtccttttcattgagcgagggacagatggtaaactgcagtgg
gaggaggaggctcatgtcgaccgtgacaacagcaatgagtgtttattgtgcgtgagggtc
cccgcctacagcgacctgtccgtcagtcggccgacgtcggtgagtctgtacgtctccaac
gggaagaggaaaaggagcagcactcactgcttcaagtatctccccgtgatgttcaaagag
gaggacacgctgctgtcccggccctctgtgctgcctctggatcaggggaccgtgtgtccc
gtaggggttcaacccagcatggacgtgggcttccccgtgagaggcgaccccatggctgac
gatcaaggcctgggcttccacctgcccccctacccctccgcctactcccctccctgcccc
accatgggttaccacgaggagtactgctccaaacccgacgccacggcgaaggagccccgg
gcggccctctccgagcgtcaccccagcttcgagaacctggagctgggcttcaccgagctc
cttccccccttgtacccccgcggcccgcagcctccctccccctccccatccccgtggctg
gactcaccctacctttcctcctcgccctctccctcccactcctcctctctcagcccgttt
cctgccggcagtcccatctcgacctcccctctgcctcccatccccacctccccttacccc
cagtactctgcttatcctcaggatgcgtgtccctctcctccctccaaccccagcccatat
caggacatgtacccggcaccctactcccactacgagggctgggacccccagggaaggctg
ctcgggatgggacatgggggagatagggatgccaagatccaggagtgccccctggagttt
accagctcttctatgcaccacattacatttgaagaagtgacggagtatatcggggaggat
atccagtctttccagtcggcctcgcacatggacaaccagccaaactga
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