Cyclopterus lumpus (lumpfish): 117746637
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Entry
117746637 CDS
T09199
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117746637 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117746637 (copb2)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117746637 (copb2)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117746637 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Ribosomal_60s
CDPS
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117746637
NCBI-ProteinID:
XP_034411793
Ensembl:
ENSCLMG00005008047
UniProt:
A0A8C2XEE2
LinkDB
All DBs
Position
17:complement(10755515..10762884)
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AA seq
938 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLNAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTDMIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSEKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
KDGKNNVAFMTYFLQGNLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NTKAAESLADPTEYENLFPGLKEAFAAEHYLRESCLGTSRPAKEYPLVTLNEDRNILEEA
QGYEPKGTFIPAVSKQTQDSEESAAPVAAAVKASPPKAVDKEEEEEEEEDDDVEEEEIPE
LSQSQKETLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcggaggctgacggctcggtcagaccgagtgaagagt
gtggaccttcacccaaccgagccatggatgcttgccagtctgtacaacggcagtgtctgt
gtgtggaaccacgaaacacagactctcgtcaagacctttgaagtatgtgacctccctgtc
agagcctctaagtttgtggcaaggaagaactgggtcattacaggagcggatgacatgcag
atccgagtgttcaactacaacaccttggagcgtgtccacatgtttgaggcccactctgac
tacatccgttgcatcgctgtccatccgacccagccctatatcctcaccagcagtgatgac
atgttgatcaagctttgggactgggataagaagtggtcatgcagccaggtgtttgagggc
cacactcactatgtcatgcagattgttattaaccccaaggacaacaaccagtttgccagt
gcctccctggacaggacgattaaggtttggcaactaggctcttcgtctcctaattttact
ttggaggggcatgagaaaggggtcaattgtattgactactatagcggaggagacaagcct
tacctcatttcaggggctgatgaccgccaagtaaagatctgggactaccagaacaagacc
tgtgttcagactctggaaggccacgcccagaatgtctcttgtgtcagcttccaccccgaa
ctgcccatcatcattactggatcagaggacggtacggtgcgtatctggcactcaagcact
taccgcctggagagtaccctgaactatggcatggagagagtgtggtgtgtgtgcggcctc
aggggctccaacaatgtggcgctaggctacgatgaaggcagcatcattatcaaggtgggt
cgagaggagccagcaatgtctatggatacgaacggaaaaatcatctgggctaaacacagc
gagatacagcaagccaacctgaatgccatgggtgacgctgagatcaaggatggagagagg
ctgccattggctgtcaaagacatgggaagctgtgagatttacccccaaacaattcagcat
aaccctaatggaaggtttgttgtggtgtgcggagatggagagtatatcatctatactgcc
atggctttgaggaacaagagctttggctcagcacaggagtttgcctgggcacatgactca
tctgaatatgccatcagagaaagcaacagtattgtgaaaatcttcaaaaatttcaaagaa
aagaaatcttttaagcctgactttggagctgaagggatctatggaggtttcttgcttggg
gtaagatcagtgaatggcctggcattttatgactgggagaacaccgacatgatccgccgt
attgagatccagcccaaacacatcttctggtcagattctggtgaactggtctgcattgct
acagaagagtcctttttcattcttcgttatatgtcagaaaaagtagctgcttctcaagag
aacaatgaaggagtgacagaggatggtattgaagatgccttcgaggtccagggagaaatc
caggagattgtgaagactggactttgggtaggagactgcttcatctacaccagctctgtg
aacagactcaactactatgtaggaggagagatcgtcactattgctcaccttgacagaacc
atgtacctgctgggttacataccaaaagacgaccgtctgtaccttggagacaaggagctc
aacattgttagctactccctgctggtctccgtcctggagtaccagacagctgtaatgagg
agggactttggaatggctgacaaggtgcttcccacaattcctaaagagcagcggaccaga
gtcgcccatttcttggagaaacagggcttcaagcagcaggcactggctgtgtccacagac
ccagaacacaggtttgagctggcattgcagctgggagagttgaagatagcctaccagctg
gctgtggaggcagagtcagagcagaagtggaagcagttggcggagctggcgatcagtaag
tgccaattcggcctggcccaggagtgcctgcaccacgctcaggattacggtggcctgctc
ctcctcgcaacagcttccggtaacgctacaatggtggggaagttggctgagggggcagag
aaggacggcaagaacaatgtggccttcatgacctacttcctgcaggggaatctggatcag
tgtttggagcttctgatcagaacaaaccgactgcctgaagctgccttcctggctcgcacc
tacctgcccagtcaggtgtcccgtgtggtcaaattatggagggagaacctggctaaggtc
aacacgaaggcggccgagtctctagcagaccccaccgagtatgagaatctgttccctggg
ctaaaagaagcctttgccgctgagcattacctccgagagtcctgcttgggcacctctagg
cctgccaaagagtatcctctcgtcacgcttaacgaagacaggaatattcttgaggaggct
cagggatatgagcccaaaggaaccttcattcctgctgtctccaagcagacacaggacagt
gaggagtcagcggctccagtcgctgcagctgtgaaggcttcacctcctaaagcagtggac
aaagaagaagaagaagaagaggaggaagatgatgatgtagaagaggaggaaatccctgag
ttatcacagtcacaaaaagagactctggatgagctggaagtggacctggacaacatggag
ctggatgacattgacaccacagacgtgaacctcgatgatgacttcctagatgactga
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