Cyclopterus lumpus (lumpfish): 117746658
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Entry
117746658 CDS
T09199
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117746658
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117746658
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Major cadherins
117746658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
YniB
Motif
Other DBs
NCBI-GeneID:
117746658
NCBI-ProteinID:
XP_034411816
Ensembl:
ENSCLMG00005002751
LinkDB
All DBs
Position
17:complement(6743735..6752200)
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AA seq
1169 aa
AA seq
DB search
MAPLLKCSPFILLVTFLALVPVGAEWIVAPRQLYENNDYTGLESIAKIRSDKVNYTRIFY
SLSGPGVDQPPEGIFGIDRNTGFVRIFSILDREAFSVYNLKGIAKFADGSRAEKDIDLDI
IVLDVNDCPPVIKVQQVGSVSESSAAGTVVMRVIATDDDEKNTLNSKMHYSIVEQSNTAG
MFFINSQTGEVQVRQNTLDRERQDTYRLQIKTSDLNGQAGGNTGTGEIVVKILDINDNVP
TMEKELYEGSVKENTINTEVMRIKAMDMDVIHTDNWLAVFEIVSGNEAGYFNITTDSVTN
EGIITIHKALDYEEQRLVNLQVAVANKAAYNFGSGTITALPPQKAYRVNINVINEKEGPR
FQPSVKVVTISEDHTTVAINKVIANYAAIDSDTLKTATDVRYAKIKDDDNWLIIDEKTGD
IKLNKLPDRESKFLINGTYYAKIISINNDVPAKTATGTIAIQVEDFNDHCPKLTATSQTK
CLEDDVIYATAVDEDEFPNSAPFEFTVIQGSTKEKWTVEHFNETTAILRDQGNLWPGSYK
VAVEVRDQQGKSCADVQIVEVNVCNCDAGTKSCGSRITKTAGFGASGVLLLLLGLLLLLL
LPLLLLFCLCGGAAAIGDFKAIPFDTKQQLISYHTEGQGEDREVPLLHAIGDIDLGTIHA
RNNNTYEGKGFLGGMIELGGAAGGSGARHTSTLTAENMDQYNQYRHSSGQVGMDHMDAGM
MTGQRQQFSQNRAGIFDGMALSNQFLGEYYSSKSNHAAHQSQQKDGFLIYDYEGQESLAG
SVGCCSLLDNDNDLAFLDDLGPKFKTLAQICQGSTLVTESVDAQVSFSPPRPVSPVWPSA
STHTHVSTHTETIRDRDRMNINTLNTSNVASGSSTIVQEERITERAQGSTTSPTVHVQDN
IVIPSPTMLIQQPTMYYAATPMYVVESNPQMVLVAGGNQQAVGQVGQVGLSQGLVQVGGL
QGTQGLVQIGGLQGTQGLVQMGGLQGTQGLVQVGGMQGTQGLVQVGGMQGTQGLVQVGGM
QGTQGLVQVGGMQGTQGLVQVGGMQGTQGVVLVDRQVGMGGVTGQVAQGLSQGTLSRSRQ
VFVVENGSSGEAQGVSLAQGIDQTGRGSAEQGPAIRGQGFQVQSRSFSLASHGSTGPNED
VALTATPKLQGSQRVVVQRKKVSVTERNI
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggctccgctgttgaaatgcagcccttttattctgctggtgaccttcctagctctggtt
cctgtgggggcagagtggatcgttgctccgagacagctgtacgagaacaatgattacacc
ggcttggagagtattgctaagattcgctctgataaggtcaactacacaaggatattttat
tccctatcggggcctggtgttgaccagccccctgaaggtatatttggtatcgaccgtaac
actggctttgtgagaatcttttccattctggaccgagaggcgttctcagtctataactta
aaaggcatcgcaaagttcgccgatgggagcagagctgaaaaggatatcgacctcgacatc
attgttttggatgtgaacgactgccctcccgtcattaaagtacagcaagtcggatccgtc
agtgaatcaagtgcagcaggtactgttgtgatgagagttatcgcgacggatgatgatgaa
aagaacacactaaactccaagatgcactacagcattgtggagcagagtaacacagctggg
atgttcttcatcaactctcagaccggggaggtccaagttcggcagaacactctcgatagg
gagagacaagatacatataggttgcagataaaaacctcggacttgaatggacaagctgga
ggaaacacaggaactggagaaattgtggtcaaaattctggacataaacgacaatgttcca
accatggagaaagaattgtatgaagggagtgtgaaggagaacactatcaacacggaggtg
atgaggatcaaagcaatggacatggatgtgattcacactgacaactggctcgctgtgttt
gaaattgtctcggggaatgaggctggctatttcaacatcactactgattcggtgaccaat
gaaggaattatcaccattcacaaggccttggactatgaggagcaacggttggtcaacttg
caagtggctgttgccaacaaagcagcgtacaattttggcagcgggactataactgcgctc
ccgccccaaaaggcctaccgagtcaacatcaacgtgatcaatgagaaggaaggcccccga
ttccaaccaagtgtcaaagtggtgactatctccgaggaccacacgaccgtcgccatcaat
aaagtaatcgccaactacgccgccattgacagcgacacgctaaagacagccaccgacgta
aggtatgctaaaatcaaagatgatgacaactggttgattattgatgaaaaaacaggcgat
atcaagctgaataaactacccgacagagagtccaagttcttgatcaatggaacatattat
gccaaaattataagcatcaacaacgatgttcccgcaaaaactgccacagggaccatcgcc
atccaggtggaggactttaacgaccactgtcctaaactgaccgcgacatctcagaccaag
tgcctcgaggacgatgtgatctacgccacggccgtagacgaagacgagttccccaattcc
gcaccgttcgagttcactgtgattcaggggagcacaaaggagaaatggacagtggagcat
tttaatgagaccacagccattctgcgagaccaaggcaacttgtggcccggctcgtacaaa
gtggcggtggaggtcagagatcagcagggaaagtcgtgcgctgatgttcagatagtggag
gtaaatgtgtgtaattgcgacgccggcactaaaagctgtgggtcgcgcataacaaagacg
gcaggttttggagcttcgggtgtcctgcttctgctcctgggactgctgctgctactgttg
ctgccccttctgctgctgttctgcctgtgtggaggtgcagcagccattggagatttcaag
gccattccatttgatacaaaacaacagctcatctcatatcacaccgagggacagggagaa
gacagggaagttcctcttctacatgcgataggggatattgatcttggcacaatacatgcc
aggaacaacaacacctatgagggaaaaggattcctagggggaatgattgaattaggaggc
gccgcaggtggaagcggtgcccgacacacttccaccttgacagccgagaacatggaccag
tacaaccagtatcgccattccagtgggcaggttgggatggaccacatggatgctgggatg
atgacaggacaaagacaacagttctcccaaaacagggctggcatcttcgatgggatggct
ctttctaatcagttcctgggggagtattattcaagtaaatccaaccatgctgcacaccaa
tcccagcagaaggacggttttctcatctatgactatgaaggccaggagtccctcgcaggt
tctgtaggttgctgcagtcttcttgacaatgataatgaccttgccttccttgatgacctt
gggcctaaattcaaaaccctggctcagatttgtcaggggtcaaccttggtgacagagtct
gtggatgcgcaggtttcattctctccacccagaccggtgtctcctgtctggccctccgct
tccacccacacacatgtcagtactcacacggagacaatcagggacagggaccgcatgaac
atcaacaccctcaacacctctaatgtagcgtctggatcctccactatcgtgcaggaggag
cgaatcactgagagagcccagggttcaaccacttctcccacggtacacgtgcaagacaac
attgtgattcccagtccgacgatgctcatacagcagcccactatgtactatgctgccact
cccatgtatgtagtcgagtccaatccccaaatggtgcttgtggcaggggggaaccagcag
gcagtaggtcaagtcggccaagttgggctaagtcaggggctggtacaggttggtggtctg
caaggaactcagggcctggtgcagattggtggcctacaaggtactcaaggcctggtgcag
atgggtggcctgcaaggaactcagggcctggtgcaggttggtggcatgcaaggaactcag
ggcctggtgcaggttggtggcatgcaaggaactcagggcctggtgcaggttggtggcatg
caaggaactcagggcctggtgcaggttggtggcatgcaaggaactcagggcctggtgcag
gttggtggcatgcagggaactcagggtgtggtccttgtagataggcaagtaggaatgggt
ggagtgacggggcaggtagcacaaggcctttcacaaggaaccctctccaggtccaggcaa
gtgtttgtggtggagaatgggtcctcgggtgaggcgcaaggtgtgagcttagcacagggc
attgatcagacaggacgtgggtctgcagagcagggtccggcgatcagaggtcaaggtttt
caggttcaaagtaggagtttttcactggcttcccatggttctacagggccaaatgaggat
gttgccctgacagccacacccaaattgcagggaagccagagggttgttgtgcaacgtaaa
aaggtctcagtcactgagagaaatatttaa
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