Cyclopterus lumpus (lumpfish): 117746812
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Entry
117746812 CDS
T09199
Name
(RefSeq) retinal homeobox protein Rx2-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117746812
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117746812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Ima1_N
Motif
Other DBs
NCBI-GeneID:
117746812
NCBI-ProteinID:
XP_034412014
Ensembl:
ENSCLMG00005019518
UniProt:
A0A8C3AGL0
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All DBs
Position
17:12853196..12858321
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AA seq
325 aa
AA seq
DB search
MHLSMDTLGIVDDSCLDNYDMAKGAGQSGGGRVHSIDVILGFTKDQDPLLHSEGDDDSQK
ANSENAQHPEKQVASDPYGHLPELCDSSQHSSYHESDLFSGDKCDEEMSNLQKEGDIAEE
SPEAVTEEEHTKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ
VWFQNRRAKWRRQEKMDTSTMKLHDSPMLSFNRPPMPPSVGPVANHMPLDPWLTSPISSA
TPMHTIPGFMGSPQGMQPAYPSHSYLNTPPGMVQGMQPMGPPPYQCTPSFNDKYPMEDDR
SSSIAALRMKAKEHIQSMDKTWQHM
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtcaatggataccctgggaatagtggacgatagttgcctggacaactatgac
atggcaaaaggtgctgggcaaagtggtggaggcagggtccacagcattgatgttatactg
ggattcactaaagaccaggaccctttactccattcggaaggggatgacgacagccaaaaa
gccaacagtgaaaacgcacagcaccctgagaagcaggtcgcctcagatccctatgggcac
cttccagaattgtgtgacagctcccaacattcttcctaccatgaatctgacctattctcc
ggagacaagtgcgatgaagaaatgagtaacctgcagaaggaaggggacattgctgaagag
tctccagaggccgttacagaagaagagcacacaaaaaagaaacacagaagaaaccggacc
actttcaccacatatcaacttcacgagctggagcgagccttcgagaagtcccactatcca
gacgtctacagccgggaggagttggcaatgaaggttaacttgcctgaggttcgtgttcag
gtgtggttccagaaccgcagggccaagtggagacgtcaagagaagatggacacaagcact
atgaagctccatgattcccccatgttatccttcaatcgtcctccgatgcctcctagcgtt
gggccagtggccaaccatatgcccctcgatccctggctgacctcgcccatctccagtgct
acacccatgcataccattccagggttcatgggttcaccgcagggcatgcagcctgcctat
ccaagccacagctatctcaacaccccacctggtatggtccaaggtatgcagccaatgggc
cctcctccctatcagtgcacacccagcttcaacgataaatacccgatggaggatgacagg
agttcgagtattgcagcactcaggatgaaggccaaagagcacattcagtcaatggataaa
acctggcagcacatgtaa
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