Cyclopterus lumpus (lumpfish): 117746914
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Entry
117746914 CDS
T09199
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117746914
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117746914
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117746914
Nuclear receptors [BR:
clum03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117746914
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117746914
NCBI-ProteinID:
XP_034412144
Ensembl:
ENSCLMG00005007379
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Position
17:complement(10163907..10177750)
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AA seq
496 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGATAVSIPNKDGV
CGGEDREEGLSRSYSSGGSSSTLSDLDDIAALPDLFDLPLTPKESSEYCSLELHGGRAST
GNTSNSSSASSSSSSLSNQNSPQQTMLDGADTTGIHLLHTHSLTHPLLKRTHALLDHLSD
DCSITDLERITQSILKSHLETCQHSAEDMKRFTWAQYTPEETRAFQNKAAEWMWQQCAHH
ITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNSTIFFNGKFA
LAQFFKALGCDDLVSAVFDLGKGLCRLQLSDEEMALFSAAVLLSPDRHWLTEGQKIKNLQ
EKVYLALQHSLHKSGASDEKLDKLVSKLPMMKSICNLHIDKLEFFRLVHPETAYSFPPLY
REVFGSEMSLPDSTNS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaggtcatcccctgtaagatctgtggggacaagtcctcaggaatc
cactatggagtcatcacctgcgaaggctgcaagggtttcttccgtcgcagccagcagaac
aacgcgatgtactcttgttcccgccagaggaactgcctgatcgaccgaacaaaccggaac
cgctgccagcactgccgtctacagaagtgtctggctttgggcatgagcagagatgcggtc
aaatttggtcgtatgtccaagaagcagcgtgacagcctctacgctgaagtgcaaaagcac
caaaagtcccaggagtgtgtgggcgccacggctgtgtccatacccaataaggacggtgtc
tgtggaggggaggatcgtgaagagggtctgagccggtcctacagcagcgggggctccagc
tccaccctcagcgacctggatgacatcgcagcgctgcctgacctgtttgacctgccgctg
acccccaaggagtccagcgagtactgcagcctggagctgcatggcggcagagccagcaca
gggaacacctccaactcatcttccgcttcttcctcgtcatcatccttgtccaatcaaaat
tccccacagcagacaatgctggacggggcagataccaccgggatccacctcttgcataca
cactctctcacgcatccgctgctgaaacgcacacatgcactcctggatcatctgtctgat
gactgctccataacagaccttgagcgcataactcagagtattctcaagtctcacttggag
acgtgtcagcacagcgctgaggacatgaagagattcacctgggcacaatacacacctgag
gaaacgcgtgcttttcaaaacaaggcagctgagtggatgtggcagcagtgtgcacaccac
atcaccaatgccattcagtatgtggtcgagtttgccaaacgcattgctggcttcatggac
ctgtgccagaatgatcagattatattactgaaagcaggctgtctcgaggtcctactgata
cgcatgtgccgagctttcaacgtcaacaacagcaccattttcttcaatggaaagtttgcc
ctggctcaattcttcaaagcactcggttgtgatgacctggtcagtgcagtgttcgacctg
gggaaaggactctgccgcctacagctgtctgatgaagagatggccctgtttagcgctgct
gttcttctttctccagatcggcactggctaactgaaggccaaaagataaaaaacctccag
gagaaggtctaccttgctctgcagcacagtctacacaagagtggagcttctgatgagaaa
ctggacaagttggtgtccaagctgcccatgatgaagtctatctgtaacctccacatagat
aaacttgagtttttccgtttggtccacccagagaccgcctacagtttcccaccactgtac
cgagaagtgtttggcagcgagatgtctctgccggactccaccaacagctag
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