KEGG   Cyclopterus lumpus (lumpfish): 117747039
Entry
117747039         CDS       T09199                                 
Symbol
snai2
Name
(RefSeq) zinc finger protein SNAI2
  KO
K05706  snail 2
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    117747039 (snai2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clum03000]
    117747039 (snai2)
Transcription factors [BR:clum03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    117747039 (snai2)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-C2H2_6 C2CH-3rd_BIRD-IDD zf-Di19 zf-C2HC_2 zf-BED zf-met Zn_SUZ12 Zf-C2H2_ZNF451_1st Zf-C2H2_ZNF451_6th Zn_ribbon_Elf1 zf-C2HE zf-C2H2_15 DUF7410
Other DBs
NCBI-GeneID: 117747039
NCBI-ProteinID: XP_034412324
Ensembl: ENSCLMG00005022810
LinkDB
Position
17:complement(19823944..19826226)
AA seq 255 aa
MPRSFLVKKHINSARKPNYSELESPTVFITPHIYRGIPQQEILSPAAYSPITVWTTSNLP
LSPLPSDLSPISGYPSSLSDASSKDHSGSESPRSDEDEPMLPKLTDPHGVEAEKFQCGLC
SKSYSTYSGLLKHKQLHCDAQTRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCKICGKA
FSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRM
SLLHKHEESGCCVAH
NT seq 768 nt   +upstreamnt  +downstreamnt
atgccacgctcttttctggtcaagaaacacataaactccgcgaggaagccaaattacagt
gagctggagagccccacagtgttcatcacgccgcacatctaccggggcatcccccagcag
gagatcctgagcccggccgcgtacagccccatcaccgtgtggactaccagcaacttgccg
ctgtccccgctccccagcgacctctcccccatctctggatacccgtcgtcgctctccgac
gcctcctccaaagaccacagcggctccgagagcccgaggagcgatgaagacgagccgatg
ctgcccaaactgacagaccctcacggggtggaggcagagaaattccaatgcggattgtgc
agcaagtcctactccacgtactctggactgcttaagcacaaacagctgcactgcgacgcc
cagacgaggaaatccttcagttgtaaatactgcgagaaggagtacgtgagcctgggggct
ctcaaaatgcacatcaggactcacacgttgccttgtgtttgcaaaatatgtgggaaggcg
ttctccagaccgtggctgctccaaggacacatcaggacgcacaccggagagaagccgttc
tcctgcccccactgcaacagggcttttgcggacaggtccaatctcagggctcacctacag
acccattcggatgtgaaaaaataccaatgcaagaactgctccaaaaccttctccaggatg
tctctcctgcacaagcacgaggaatctggttgttgtgtagcacactga

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