KEGG   Cyclopterus lumpus (lumpfish): 117747043
Entry
117747043         CDS       T09199                                 
Name
(RefSeq) LOW QUALITY PROTEIN: geranylgeranyl transferase type-2 subunit beta-like
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:clum01006]
    117747043
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117747043
Enzymes [BR:clum01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     117747043
Prenyltransferases [BR:clum01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   117747043
Membrane trafficking [BR:clum04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    117747043
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    117747043
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C
Other DBs
NCBI-GeneID: 117747043
NCBI-ProteinID: XP_034412328
Ensembl: ENSCLMG00005001657
LinkDB
Position
17:complement(14901947..14908525)
AA seq 335 aa
MMKHKGTQVKDVIIKPEAPSTLQLDKHADYIAAYGSXKDDYEYTLSEYLRMSGIYWGLTV
MDLMGQLPRMNRQEIIDFIKACQHECGGLSASIGHDPHLLYTLSAVQILCLYDNVDALDV
DKVVEYIKGLQQENGSFAGDKWGEIDTRFSFCAVATLALLGKMDSINVDKAVEFVLSCMN
FDGGFGCRPGSESHAGQIYCCSGFLSLTGQLHQVNADLLGWWLCERQLPSGGLNGRPEKL
PDVCYSWWVLASLKIIGRIHWIDKAKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIA
GLSLLGDEQIKPVNPVLCMPEDVLQRRDLQPDLLS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgatgaaacataagggtacccaagtgaaagatgtcatcattaagcctgaggctcccagc
acactgcagctggacaaacatgcagattacatcgctgcctacggctccnaaaaggatgac
tatgagtacacgctgtcagagtacctgaggatgagcggcatctactgggggctgactgtg
atggacctgatggggcagctcccccggatgaaccgccaggagatcatagactttatcaaa
gcctgtcagcatgagtgtggaggcctcagcgctagcattggacacgacccccacctgctc
tacaccctaagcgccgtccagatcctttgtttgtatgacaatgtggatgcgcttgatgtg
gacaaagtggtggagtacattaaagggctgcagcaggaaaatggctcatttgcaggggac
aaatggggagaaatagacacaagattttctttctgtgctgttgctacacttgcattactg
ggcaagatggactcaataaatgttgacaaagctgtagagtttgtcttgtcctgtatgaac
tttgacggaggttttggctgcagacctggttcagagtctcatgctggtcagatatactgc
tgctctggcttcctgtcgctcacagggcagcttcaccaggtgaacgctgacctgctgggc
tggtggctctgcgagaggcagctgccgtccggaggcctcaatggacgaccggagaagctt
ccagatgtttgctactcgtggtgggttttggcatcgctgaaaatcattggtcggatccac
tggatcgacaaggccaagctgcgatcgtttattctagcttgtcaagatgaggagaccgga
ggctttgccgacaggccgggagacatggtggatcctttccacactctgtttggaatcgca
gggctctccctcctcggagacgaacagatcaagccagttaatccggtcctctgcatgccg
gaggatgtccttcagaggcgtgacctgcagcctgacctcctcagctag

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