Cyclopterus lumpus (lumpfish): 117747079
Help
Entry
117747079 CDS
T09199
Name
(RefSeq) solute carrier family 22 member 13-like
KO
K08209
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 13
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117747079
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
117747079
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
117747079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Ycf66_N
DUF1778
Motif
Other DBs
NCBI-GeneID:
117747079
NCBI-ProteinID:
XP_034412373
LinkDB
All DBs
Position
17:6075319..6082922
Genome browser
AA seq
539 aa
AA seq
DB search
MADFGEILQSTGEFGLFQKITLLALCLPNVIQPFHFASVFFIQSDPERHCNTDWILQADS
NLTTDEQLNLTLPREEDGTFSRCQMFLPVEWDIGAIREYGLNETTGCRDGWVYYDTLYEA
TIVTDFDLVCEQANLLEVAQAVLMAGILFGCLLFGPFAESFGRKRAAQIPVIVMLIFSLT
TGLCPNFYLYLASQFMAGIGVGGFRLNGVILATEWIGPSKRSWGACVAQLFGAGGNAVLA
GVIYFIRDWRLAQLITAAQLAVVAIYIWFIPESARWLLDKGRTEEAKQLIVKAAAINKRT
VPDSLLEKIVKKETEKKGGIIILIQSSVLRKYFFTLILAWFSLNLTYYCLSFNVGNLGLD
IFLTQLMFGLTEVPAHILCIWLLEVMGRKVSLMATLLIGGFLCVLILAVPQGDAVAVTTL
AISGRFFINWAGSICNVYVQELFPTSFRQTASGLCSIASRAGGLLSPLLNILALYHWSIP
IIVYSSLTLTSGALSFLLPETRRKELPDSTHEAEGNRKKNPLKNHSESNEPARVTSTQL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttggagagattctccagagtacaggagagtttggattgtttcagaagatc
actcttcttgctctttgcctcccaaatgttattcagccttttcactttgccagtgtattt
ttcatccagtccgatccagagcgacactgtaacacagactggatccttcaggcggactcc
aacctgaccacagatgagcagctgaacctgactctgccccgcgaggaggacgggaccttc
agcaggtgtcagatgtttctccctgtggaatgggacatcggcgccatcagggagtacgga
ctcaatgagaccacagggtgccgggatggatgggtgtactacgacacactgtatgaggcc
accatagtcactgattttgatctagtttgtgagcaggctaatttgttggaagtggcacaa
gcagtgttgatggctggcattctctttggttgtctcttatttggaccttttgctgaatcg
ttcggtcgtaaacgggcagctcagattccagtcattgtgatgctgatattttctctcaca
actggattatgtcccaacttctatttatatttggcatcccagttcatggcggggattggc
gttggaggtttccgactgaacggtgtcatattggccactgagtggatcgggccttccaaa
agatcgtggggggcatgtgtggctcagctatttggtgcaggtggcaatgccgtcctggct
ggtgtcatctacttcatcagagactggagactggctcagctaatcacagcagctcaactt
gcagttgttgctatttacatatggtttattccagagtcagccaggtggctgttggacaaa
ggaaggacagaagaggctaaacagctgattgtcaaagcggcagccatcaacaaacgcact
gttccagactctctgctggaaaagattgttaagaaagaaactgagaaaaagggaggcata
ataatacttatccaatcctctgtgcttaggaagtatttctttaccttaatactggcatgg
ttctcattgaatctcacctactactgcctttctttcaatgtgggaaaccttggtttggac
atcttcctgacgcagctcatgttcggtctgactgaagtaccagctcatatcctttgcatc
tggctgttggaggtaatggggagaaaagtgtccctgatggcaactctcctgattggagga
ttcttgtgcgtcctgatcctcgctgttccccaaggtgacgctgttgctgtgaccacctta
gcaatctcaggacgttttttcataaactgggcaggatccatatgcaacgtgtatgttcag
gagctgttccccacgtcttttcggcaaacggcctctggtttgtgctccattgcaagcaga
gctggtggcttgctgtccccattgctcaacatcttggctctgtaccactggtccataccc
atcatcgtctacagcagcctcactctgaccagtggggctctcagcttcctgctccctgag
accaggaggaaagagcttcctgattcaacccatgaggccgagggcaacagaaaaaagaac
cccctgaagaaccacagtgaatcaaacgagcctgcccgagtcacatccacacagctgtag
DBGET
integrated database retrieval system
