Cyclopterus lumpus (lumpfish): 117747424
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Entry
117747424 CDS
T09199
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747424 (dennd4c)
Membrane trafficking [BR:
clum04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117747424 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR_3
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
117747424
NCBI-ProteinID:
XP_034412510
Ensembl:
ENSCLMG00005011298
LinkDB
All DBs
Position
18:complement(11553981..11581899)
Genome browser
AA seq
1973 aa
AA seq
DB search
MPLTASLRCSHIYASAFDCLPASSSRTLKGNRVLPGSSFLSPFSVLPAMIEDKGHRVTDY
FVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINRSAGETVPEGYTCIDSTYSGHPAN
LNHGSLKSPELFLCYKRGRGKSPLIDIGVLYEGKERLIQGCEVIQATPYGRCANVNNSSG
TSQRIFITLRRAPPIQPQNSLAVTDICVIVTSKGEIPPHTFCKVEKNLNCGMWGSNVFLC
YKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIECWDPNTRDPLPVF
STFVLTISSGEKVYGSAIQFYEPHPVDQLSEKQKIQLGLLTTVEKKVIPNRPVNSNKCIC
LLSRWPFFESFRKFLMFLYKLSVSGPQPLPIEKHISHFMHNVSFPSPQRPRILVQLSAHD
NLILSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFVLLESKILLHSLRPAVLTGVAEA
VVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPPDVVCVDLDTNTI
YLSDEKRHSNWKNLPKKPGKSLINALSNLHHQLATVSVPQIEQENSAVDMTPIEADFTWH
KKKTSLEMEIQEAFLRFMATILRGYRNYLKPITQEPSEKATAADSLYDLQGLLKSRDRAH
QKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITDKGTKVEGESSED
TRLLELDESQKSEHTVFVMPPEPPVGDGTEPATRYTYKSFPRLHTELFDRPREFRPVLSS
RPPGASLLLAKRTKQEIKLAYKMAKHFHSNPPLWARCLFSHCYSLWFICLPAAVRLSKSK
SRAMLQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGVWGLPVMAVRILVEMKKAGVHPNAI
TYGYYNKAVLESPWPSTNRSGLFMWTKLRNVLRGVAQFKHALDRTPSKKEPTTAPSIGGS
AVTDADRLSHGSADSSSEVNGEEHNLFAHSRGMGDTADNHCGTGRQSDQGYGSKDELHQE
LMEPSHSAVLSTEGRNNPRAQHNGLKPGGDVAGSVDSAVAVAEPPSPVDVPSPVPSIVKL
SGSVDSGRETGTGKLFRRHSKTDNVSLPEDDASLPPGDGANQPQQQRQKSFAERSCSFSA
ETRDRMLLEKGVDHMASQMGADARILAAALCTGLSPSPNSVSKSLFKDLEEEPEDDPGLT
LGKLPEEEGAAAGAATAAEEEGKGEDEEVDGTEFKMGKRERKQTETSEEDPGLRVPTLER
ADVEVGADPLSLLVTESDESASVSSLEPPRSMPAVVSRNLAEEIEMYMSLRSPLSVKSSS
MELQQAQGDSADPPQPKQSLERRASLPVPPVKTPTGSPGDTPKRSPTTVTRSKTFAAKTK
TPSSATRSPGPRSASLTALVKSSQGGSLGSVINSISAIKMDHLLSGPKIDVLKSSMKQAA
NVASKVWGAVASAYSYSDDEEDQAQGGGGFPSHLDEHTLAADESPERGAIPGLVANGLNQ
SCTSLGSSSGSSDTGRGTHQTHPTPGRAARGPDSEHGSLHHASSSSIYQNCALEVLMSSC
SQCRSCEALVYDEEIMAGWTADDSNLNSDCPFCRAAFLPLLHVEFHDLRTMTGFYINPSA
SGDSIHSTSTQPIASSSADIKTPELITFPEEEPRETPDNLPVAHKSLIPEPAQSDPLGLL
EHQAAGKQRSSSGTSLTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSLQAVSDGMGTKRP
NPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPTHL
PGLILTSEHCNNGVQLPLTSLSQDSKQVYVQLLWDNINLHQEHGEPLYLSWRTLLEKKGM
LAPTDHQEIRTLLNTIVRNIQTNDIYGPINLLIREIKQRPEGVKRQRSIYREILFLSLVA
LGKENIDVEAFDREYRLAYDELSAEQLKSLHRIDEPPSPNVQWCLKCFGTPVI
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgccattgactgcatctctgaggtgctcgcatatctacgcctcagcatttgactgtttg
ccagccagcagcagtcgaaccctgaagggcaacagagttctccccggctccagcttccta
tcaccgttttcggtactcccagccatgatcgaggacaagggtcaccgggtgaccgactac
tttgtagtggccgggctgacggacaaatccacccccctggagcaggacctgtcggagacc
aagtccagtgggcccaaagcgcccatcaccgacttggccgtcatcaacaggtcggcggga
gaaacggtccccgagggctacacgtgcatcgacagcacctacagcggccatccagccaac
cttaatcacggcagtctgaagagccccgagctgttcctgtgctacaagagaggtcggggg
aagtctcctctcattgacatcggtgtgctgtacgagggtaaggagcgtctgatccagggc
tgcgaggtcatccaggccacgccgtacggccgctgcgccaacgtcaacaacagctccggc
acctcgcagcgcatcttcatcacgttgcgccgcgcgccgcccatccagcctcagaactcc
ctcgcagtgacggacatctgcgtcattgtcaccagtaaaggggagataccgccgcatacc
ttttgcaaagtggaaaagaacctcaactgcggcatgtggggctccaatgtgttcctgtgt
tacaagaaatcagtgtctgcgtccaattccatcagttacaaagccggtctcatctttcgt
tacccagaagaggactatgagtcttttcctctgtcggaatcagtccctctgttttgtttg
ccgatgggcgccaagatcgagtgttgggatccaaacacacgcgatcctctgcccgtcttc
tccacgtttgtcttaaccatctcttctggtgaaaaggtgtacggatcagccatccagttc
tacgagccgcatcccgtggatcagttgagcgagaagcagaagatccagctgggcctgctc
accaccgtggagaagaaggtgatccccaaccggcccgtgaacagcaataaatgcatctgc
ctgctctcccgctggcccttctttgagtccttccgcaagttcctgatgttcctctacaag
ctctccgtctccggccctcaaccgctgcctattgaaaagcacatctcacacttcatgcac
aatgtgtcatttccttcccctcaaaggccaagaatattagtccagctctcggcacatgac
aacttgatcctctcccagcctgtgtgtacacccttgccgctcagcggggcggactacggc
actctgctgatgaacctgggctcggagaactgcgccacgctgctgcactttgtcctgctg
gagagcaagatcctgctgcactccctccggcccgccgtgctcaccggagtggccgaggct
gtggtggctatgatcttcccctttcagtggcagtgtccctacatccccctgtgcccactt
tccctcgcaggcgtcctcaatgctccgtgtccgtttatcgtgggcgtggactcccgctac
ttcgacctttacgaccccccgccagatgtcgtctgtgtggatctggacaccaacactatc
tatctttctgacgaaaagagacacagcaactggaagaacctgccaaagaagcccggcaag
agtctcattaacgcactgagcaacttgcaccaccagctggccaccgtttcagtacctcaa
atagaacaggaaaactctgcagtggacatgacccccatagaggcggacttcacctggcac
aagaagaagacttccctggagatggaaatccaggaggccttccttcgcttcatggccacc
atcctgagaggctaccgcaactacctcaagcccatcacccaggagccttccgaaaaggcc
acagctgcagactccctctacgacctgcaagggcttctcaaaagcagagaccgagcccac
cagaagttctactcccagctcaccaagactcagatattcatccgcttcattgaggagtgc
acctttgtcagtgacaaggacaccgggctggccttttttgacgactgtgtcgagaagctt
tttccctctgataaaatcaccgacaagggcaccaaggttgaaggcgagtcgtccgaggac
acgagactgttggagctggacgagtcccagaagagcgaacacactgtttttgtcatgccc
cctgagcctccagttggcgatggaacggaacctgccaccagatacacctataaaagtttc
ccccggctgcatacggagctgttcgaccgtcctcgggagttccgcccagtgctcagcagc
agaccacccggggccagtctactactggctaagaggacgaagcaggagatcaagctggcg
tataagatggcgaagcatttccactccaaccctccgctgtgggcccgctgcctgttcagt
cactgctacagcctgtggttcatctgcctgccagcagctgtgcgactctccaagtctaaa
agccgtgccatgctgcaggcgtacaacgtcctcctgaagatgaggaccactgaggtggag
gtgctggatgaggtgtgttacagagtggtgatgcagctctgtggcgtgtggggtcttcct
gtcatggccgtgcgaatcctggttgagatgaagaaagctggagtgcatccaaacgccatc
acatatggatactacaacaaggccgtcttagagagcccatggccgagcactaaccgcagt
ggcctctttatgtggaccaagctccgtaatgtgcttcgtggagtggcccagttcaagcac
gctctagaccgaacaccttccaagaaggaacccaccacagcgccatcaatcggtgggtca
gcagtcactgacgctgaccgcttgagtcatggaagtgctgacagctcaagtgaagtcaac
ggtgaggaacacaacctatttgcccacagccgcggcatgggagacacggcagacaaccac
tgtggcacagggcggcagtctgaccaaggctacggctccaaggatgagttacaccaggag
ctgatggagccctcgcattcagctgtcctgtccacggaggggagaaacaatcccagagcc
cagcataacggtttaaaaccaggaggagacgttgctggctcggtggacagtgctgtagca
gtagcagagccccccagtcctgttgatgtcccctcgcctgtgcccagcattgtgaaactg
tcggggagcgttgatagcggcagggaaacgggtacagggaagctgttcaggagacacagc
aagaccgataacgtgtctctccctgaagacgatgcctcgctgcccccaggggacggagcc
aaccagcctcaacagcagcggcagaagtccttcgctgagcgcagctgtagcttcagcgct
gaaacccgtgacaggatgctcctagagaaaggcgtggaccacatggccagtcagatgggt
gctgatgcccggatcctggctgcagcgctctgtacaggcctaagtccatcccctaatagt
gtgtccaaatcactttttaaagacctggaggaagagccggaagacgatccgggcttgaca
ttagggaagctgccagaggaagagggagcagcagcaggagcagcaacagcagcagaagaa
gaagggaagggagaggatgaagaggtagacgggactgagttcaaaatggggaaacgagag
aggaagcagactgaaacaagcgaggaggaccctgggttgcgagtgccgaccctggagagg
gcggacgtggaggtgggcgctgacccactttccctcctggtgaccgagagcgacgagtcg
gcctccgtcagcagcctggagccgccgcgctccatgcctgctgtggtgtcccgcaacctg
gccgaggagatcgaaatgtacatgagcctgaggagccccctgagcgtgaagtcttccagc
atggagctccagcaggcccagggagactccgccgaccccccacagcccaagcagtctctg
gagcgcagggctagcctccctgtgcctcctgtcaaaactccaactggctccccaggcgac
acacccaaacgcagccccaccactgttactcgctccaagactttcgcagcgaagacgaag
acccccagcagcgcaacacgtagcccgggtcctagatcggcctcgctgacggcgctggtc
aagtcctcccagggagggtcgttgggctcagtcatcaactccatttcagccatcaagatg
gaccacctcttgtcgggacctaagatagatgtgcttaaatcgagcatgaaacaggcggca
aatgtggccagcaaagtgtggggagcagttgcttcagcctactcctactcggatgacgag
gaagaccaagctcagggtggcggcggcttcccatcccatctggatgagcacacgctggct
gcagatgagagccccgagagaggagccatcccagggttggtggccaacggtctcaaccag
agctgcaccagcctgggcagcagcagtggcagcagcgacacgggccgagggacccaccag
acacatccaactcctggacgagcagccaggggtccagactccgagcacggctctttacat
cacgcttcctcctcgagcatttaccagaactgtgcgttggaggtgctgatgtccagctgc
tcccagtgccgctcttgtgaagcgctggtgtacgatgaggagatcatggcaggctggaca
gctgacgactccaacctgaatagcgactgtcccttctgtcgcgcggcctttcttccctta
ttgcacgtcgagtttcacgacttgcgaactatgaccgggttttacatcaatcccagtgcc
tcaggagacagtatccacagcaccagtacccagcccatagccagcagctcagctgacatt
aagacaccagaacttatcactttccctgaagaggaacctcgggagactccagacaacctg
cctgttgcacataagagtcttattccagagccggcgcaatcggaccccttaggtctcctg
gagcaccaggcagcggggaagcagcggagctccagtgggacgtcactgacgcgcagcaac
agtgtcggtggcccgctgcagagcctggactactcccagagacctggacatggcgtctcc
accaccagcctgccctgcagcctgcaagcggtgtcggatggcatggggaccaaaaggccg
aaccccaagcctgtgtccgtaccgtacctcagccccttggtactgcgcaaggagctggag
accctgttggagaacgagggagatcaggtgatctacacccacaagttcctcagccagcac
cccatcatcttctggaacctggtttggtatttccgtcgcctggaccttcccactcaccta
cctggcctcattcttacctctgaacactgcaacaatggagtacagcttcccctgacgtca
ctgtcccaggacagtaagcaggtctacgtccagctcctgtgggacaacatcaatctacac
caggaacatggagagcccctctacctgtcctggaggaccttgttggagaagaaggggatg
ctggctcccacagaccaccaggagattcgtaccctcctcaacacgattgttcgcaacatc
cagaccaacgacatctacgggccaatcaacctgttgatccgagagatcaagcagcgccca
gagggcgtcaaaaggcaaaggagtatctatagagaaatattgttcctctcactggtggca
ctggggaaggagaacatcgacgtggaggccttcgacagggagtaccgcttggcttacgac
gaactgagcgccgagcagctcaagtccttgcaccgcatcgatgaaccgcccagccccaat
gtccagtggtgccttaaatgcttcgggacccccgtcatctga
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integrated database retrieval system
