KEGG   Cyclopterus lumpus (lumpfish): 117747453
Entry
117747453         CDS       T09199                                 
Name
(RefSeq) polyubiquitin-like
  KO
K04551  ubiquitin B
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04120  Ubiquitin mediated proteolysis
clum04137  Mitophagy - animal
clum04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117747453
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117747453
   04137 Mitophagy - animal
    117747453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117747453
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117747453
Ubiquitin system [BR:clum04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117747453
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   117747453
  Exosomal proteins of other body fluids (saliva and urine)
   117747453
  Exosomal proteins of colorectal cancer cells
   117747453
  Exosomal proteins of bladder cancer cells
   117747453
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Ubiquitin_5 Ubiquitin_4 Dsc3_N
Other DBs
NCBI-GeneID: 117747453
NCBI-ProteinID: XP_034412570
LinkDB
Position
18:5421015..5424173
AA seq 192 aa
MVVKVFIEEPCGKTTEVEVRDAEYESCTVLQLKREMRDNGTLPVGSQQLIFNGRQLEDAA
KLSDYGIQHESTIHSVVKSTEISFFLKNYRGQTFGMKMDEDEMKSCLVLDLKTRIRAIEG
TPEDQQKLIHLTKLLENDRTLSHYNIENNSFIHLTPKLRGGEVHPQGPGGMGDKGGKNES
MENLFLFQTTPN
NT seq 579 nt   +upstreamnt  +downstreamnt
atggtcgtgaaggtcttcatcgaagagccgtgtgggaagaccacagaggtcgaggtgcgc
gacgcggagtacgagagctgcacggtgctgcagctgaagagagagatgcgggacaacggc
acgctgccagttggttcccagcaactgatcttcaatggccgccagctggaagatgctgct
aaactgtctgactatggaatccagcacgagtcaactattcactcggttgttaaatccacg
gaaataagtttcttcctaaaaaattatcgcggtcaaacctttgggatgaagatggatgaa
gatgagatgaagagctgcctggtgctggatctgaagaccaggatacgcgctatagaggga
accccagaagaccaacagaagctgatccacttgaccaaactgttggagaacgaccgtact
ctgtctcactataacatcgagaacaactcattcattcacctgactccaaagctgcgtggg
ggagaggtgcatccacagggacctggtggaatgggtgacaaagggggcaaaaacgaaagt
atggaaaacctgtttctttttcaaactactcctaactga

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