Cyclopterus lumpus (lumpfish): 117747476
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Entry
117747476 CDS
T09199
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117747476
03012 Translation factors [BR:
clum03012
]
117747476
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117747476
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117747476
mRNA cycle factors
Stress granule specific factors
117747476
Translation factors [BR:
clum03012
]
Eukaryotic type
Initiation factors
eIF-4
117747476
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117747476
Exosomal proteins of bladder cancer cells
117747476
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UvrD-helicase
CMS1
Flavi_DEAD
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
117747476
NCBI-ProteinID:
XP_034412620
Ensembl:
ENSCLMG00005020514
UniProt:
A0A8C3GA09
LinkDB
All DBs
Position
18:complement(12662120..12669697)
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AA seq
405 aa
AA seq
DB search
MSAEYDNRDNNGPEGMEPDGIIESNWNEITDSFDEMNLREALLRGIYAYGFEKPSAIQQR
AIMPCIKGYDVIAQAQSGTGKTATFAISILQQIDVELKGTQALVLAPTRELAQQIQKVVL
ALGDYMGANCYACIGGTNIRSEVQKLQAESPHIVVGTPGRVFDMLNRKNLSSKFIKMFVL
DEADEMLSRGFKDQIYEIFQKLASSTQVVLLSATMPADVLEVTKKFMREPVRILVKKEEL
TLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA
LHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG
RGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaatatgataatagagacaataatggcccggagggcatggagccagatggg
atcattgagagcaactggaatgagatcacagacagttttgatgagatgaacctgcgcgag
gctctgctcaggggaatttatgcctatggtttcgagaagccctctgctatccagcagaga
gccattatgccttgtatcaagggttatgatgtcatcgctcaggcccagtctggcactggg
aagactgccacctttgccatttcgatccttcagcagattgatgtggagctgaaaggcacc
caggctttggtcttggcgcccaccagggagctggctcagcagatccagaaggtagtgctg
gccctgggtgactacatgggagccaattgctatgcctgtatcggcgggaccaacattcgc
agtgaagtccagaagctccaggctgaatcccctcacattgtggtgggaaccccaggccgt
gtctttgacatgttaaatcgtaaaaacctctcttctaagttcatcaaaatgtttgtgctg
gacgaggctgacgagatgcttagtcgagggttcaaggaccagatctatgagattttccag
aaactggcaagcagcacacaggttgtcctcctgtcggccaccatgccagccgacgtgttg
gaagtcacaaagaagttcatgcgtgaacctgtcagaattctggtgaagaaggaggagctg
acccttgagggcatccgtcagttctacatcaacgtggagaaagaggagtggaagctggac
acgctgtgtgacctgtacgaaaccctgaccatcacacaagcggtcatcttcatcaacaca
aggaggaaagtggactggctgaccgagaagatgcacgccagagacttcaccgtgtctgct
ctgcacggtgacatggaccagaaggagagagacttgatcatgagagagttccgctctggc
tccagtcgagtcctcattaccactgacctgctggccagaggtattgatgtccagcaggtg
tctctggtcattaactacgacctgccgaccaacagggaaaactacatccacaggattggt
cggggtggtcgttttggcagaaagggagttgccatcaacatggtgaccgaagacgacaag
cgaaccctgagggacattgaaacattctacaacaccaccgtggaggagatgcccatgaat
gtggccgatcttatctag
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