Cyclopterus lumpus (lumpfish): 117747484
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Entry
117747484 CDS
T09199
Symbol
arhgef11
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117747484 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747484 (arhgef11)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117747484 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
117747484
NCBI-ProteinID:
XP_034412634
LinkDB
All DBs
Position
18:complement(2119928..2135886)
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AA seq
1430 aa
AA seq
DB search
MSLRQPTSTLDRLSSLTIGDSERKSSAAQQRELMADVSAETTGLVQRCVVVQKDQLGFGF
TVCGERVKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSGPYAALTL
QGPPPSAASLPLEPLPTDLAPIQRTSLGGEAPPPPPPPLPSGLSSTPSQRITGPKPLQDP
EVQKHATQILRKMLEQEEAELQELMEAQLRNPSPSLGERIESAQRRARQVRVKIQQDLEG
TRSELSVGYVQAGEGRLSMDSSEGDVEALESPHSSPSFSFRTPQHRRQNADTHALSDSGG
KAQIIGPEEEDEEDDGYAFNEMDGPFQDIELLKSRPAHMAVFMRYVFTQLLDPNPLLFYL
SVEAYLGSSPKDARALAPQICSHFLDPDAPLKIKVREEYLSDIESRLHAQEDIRGPLSEL
QQQVLPDISDQIQDYRNKQMMGLGSLFGEGDLLQLDGDPVKERQVVDRQVTALWEILSKH
EEDRSSPLASAVHLYLRHSGIKLRDSKVFPGLSSEKEKWLAFLKTKKLSGTKRDKDGEDK
RRNPILKYIGKPRTSSQSTFHVPLSPTEAPVSAVRPGSVRNIIQQFENHTETPEDGDAAA
PQRLSSSSLGEDGMDSPAVSVRLARSESLKAQGEGRRRGVVSGAESVPRSRSDVDMEDCG
EEGGEGPGLRLLQHSASSSASGSSARSLENPTPPYTPRSRRRSVDSPLALLPDAAALEEE
ASDGQNWQDTVPPQLLATLSPREVDRQAVIYELFTTEASHLRTLKVLDQVFFQKMRSVLN
SDELACIFPNLPQVYELHASLCEAMKKRREAAIVQDIGDVMLARFEDAAGDEFQEQASQL
CSQQSQALELIKNKQRKDPRFAHIIQECEASPHCRRLQLKDLLVSEMQRLTKYPLLLDNI
MKHTEAGSSDLPSLQRAQACCRGILQAVNEVVRETEHRQRLGQYQRRLDAAPLFKSLDLS
TKRMIHEGPLTWKVSKDKQMEIQALLLSDCLVLLQRGPDDRLQLRYPSRWLGGGGGGSGD
SKTSFSPLVKLDSLLVRSVATDNKALYVISTTERQIYELVAGTSSEKNTWKDLLERTISS
AGGSSPLISHGSIPISSPSLRSASPVSTGSNVYADNSLTEQSDSTETHSSSDDMALSTDA
ATDQSEAFAQGKAAGVADAALQDVETLRQLILRDLEEDGWSHDSDDTPTNQAAERRRPES
PEAVLNFSADEWEAEPDVEDPPPDAEPSSSVQIVRKAVVAGPPPPPPPPSSSSVPDDITA
DVTLPSDQSSEPRGDATAQGNTFYLVMPTEPGESVTDDLGDPAAAGRLPQPPEEAASTQP
EEEEAPEADQSERGEEAGQSQAGRQSHVIKNVDEIFHTIEGLMSKLRHLKEIETSHQQLL
KTLREPFVGPESEDQRCCSATVSRTPSLDRGSGDGKEGSPAEPKIQSTGF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgtcaacccacctccaccctggacaggctcagcagtctgaccatcggggac
tcggagcgcaaatcctccgccgcccagcagagggagctgatggcggacgtctctgctgag
actaccggtctcgtccagagatgtgtggtcgtgcagaaggaccagctcggcttcggcttc
acggtgtgtggagagagagtcaagctagtgcagaacgtccggccgggcggagcagcagtc
aaagccggagtccacgaaggggaccggatcatcaaggtgaacggctcgctggtgtcctcc
atgtcccatcaggaggttgtaaagctcatcaaatcgggtccgtacgccgctctgacacta
caaggtccgcccccttccgccgcctccttgcccttagagcccctccccactgacctcgcg
cccattcaaagaacgtctctgggtggggaggctccgccccctccaccaccacctctgccc
tctggactgagcagcaccccctcccaaagaatcactggacccaaaccactacaggaccca
gaagtacagaaacatgccactcagatactcaggaagatgctggagcaggaagaggctgaa
ctgcaggagttgatggaggcgcagctgaggaacccgtcgccgtcgctgggcgagcggatt
gaaagcgcccagaggagagctcgccaggtccgggtcaagatccagcaagatctggaggga
acgcgctctgaactgtccgtcggctacgtccaagcaggagaaggtcggctgtccatggac
tccagcgaaggagacgtggaggcccttgagagcccccactcctccccctcattctccttc
aggaccccacaacaccgacggcagaacgccgacacacacgccctgtctgactcgggcgga
aaggcccagatcattggccccgaggaagaggatgaagaagatgacggctatgcgtttaat
gagatggacggtccgttccaggacatcgagctgctgaagtcgcgcccggcgcacatggcg
gtgttcatgagatacgtgttcacgcagctgctggaccccaaccctctgctgttttacctg
tcggtggaggcctacctgggctccagccctaaagacgcccgcgcactcgcgccccagatc
tgctcccatttcctggacccagacgcgcctctaaaaatcaaagtacgagaggagtatctc
tcagatatagagagtcgccttcatgcccaggaggacatcagaggacctctgtctgagctg
cagcagcaggtgctgccggacatctccgaccagatccaggactacaggaacaagcagatg
atggggctcggctctctgttcggagagggagacctgctgcagctggacggagacccggtg
aaggagagacaggtggtggacagacaggtcaccgccctctgggaaatactatcaaagcac
gaagaggaccggagttctcctctggcgtcggccgtgcacctgtacctgcgtcattcgggc
atcaagctaagagactccaaggtgttccccggtctgagcagcgagaaggagaagtggctc
gccttcctgaagaccaagaagctgagcggcaccaagagagacaaagatggggaggacaaa
aggagaaatcccatcctgaagtacatcggcaaaccccggacctcgtcccagtccacgttc
catgtccccttgtcacccaccgaagcgcccgtgtctgcagtccggcccggcagcgtgagg
aacatcatccagcagtttgagaaccacacggagacgccagaggacggagacgccgccgcc
cctcagcggctctcctccagcagcctgggggaggacggcatggacagcccggcggtctcg
gtgcgtctggcacgcagcgagtctctgaaggctcagggagaaggccggcggcgaggcgtc
gtctcgggggcggagtctgtccctcgctcccgcagcgacgtggacatggaggactgcggg
gaggaggggggggaggggccgggcctccggctgctgcagcacagcgcgtcgtcgtccgcc
tccggcagctcggcgcggtctctagagaaccctacacccccatacacccctcggtctaga
cgcaggagcgtggactcgccgctggccctgctgccggacgccgcggcgctggaggaggag
gcgtccgacggtcagaactggcaggacacggttccccctcagcttctcgccacgctcagt
ccgagggaggtggaccggcaggccgtcatctacgagctgttcaccaccgaggcgtcccac
ctgcgcaccttgaaggtcctggaccaggtctttttccagaagatgaggtctgtgctgaac
tctgatgagctggcctgcatcttccccaacttgccccaggtctatgagctccacgcgagc
ctgtgcgaggcgatgaagaagcgacgggaagctgccatcgttcaggacatcggggacgtc
atgctggccagatttgaagacgcagccggagacgagtttcaggaacaagcgtcgcagctg
tgcagccagcagtctcaggctctggagctcatcaagaacaagcagcgcaaagacccacgc
ttcgctcacatcatccaggagtgcgaggcgagtcctcactgtcggaggctgcagctcaaa
gacctgctggtgtcggagatgcagcggctcaccaagtacccgctgctgctggacaacatc
atgaagcacacggaggccggctcgtcggacctcccgtcgcttcagcgcgcccaggcttgt
tgccgagggatactgcaggctgtaaacgaggtcgtcagggaaacggaacaccggcaacgc
ctcggccaataccaacgcaggctggacgccgcccctctgttcaagagtctggacctcagc
accaagaggatgatccacgaaggtcctctcacgtggaaagtcagcaaagacaagcagatg
gagattcaagcgctgctgctgtcggactgcctggtcctcctccagaggggcccggacgac
cggctgcagctcaggtatccgtcccgctggctgggcggaggcggcggaggcagcggggac
agcaagacctccttcagccctctggtgaagctggactctctgctggtccgctcggtagct
acagacaacaaagccctctacgtcatcagcaccacggagaggcagatctacgagctggtg
gctgggacgtcgtcggagaagaacacctggaaggatctactggaaaggaccatctcgtcg
gccggcggttcgtcgcccctcatcagccacgggtccataccgatatcctccccgagtcta
cgcagcgcgtcccccgtgtcgactggcagcaacgtctacgcagataactccctaacggag
cagtcggattccacggagactcattcctccagcgacgacatggcgctctcgacggatgcg
gccacggaccaatcggaagccttcgcccaaggaaaagcagccggtgtggcagacgccgct
ttgcaagacgtcgaaacgctgaggcagctcatactgcgagacctggaagaggacggctgg
agccacgactcggatgacacgcccaccaaccaggcggccgaaagacggcggccggagtct
ccggaggccgtcctcaacttcagcgccgacgaatgggaggcggagcccgacgtagaggat
ccgccccccgacgcagagccgtccagcagcgttcagatcgtacggaaagctgtggttgcg
ggtcctcctcctcctcctcctcctccttcttcttcttccgttcctgatgacatcaccgct
gatgtcaccctcccctccgaccaatcgtccgagccgagaggcgatgccaccgcgcagggg
aacacgttctacctggtcatgccgacggagccgggagagagcgtcaccgacgacctcggc
gaccccgccgccgccggccgcctccctcagcctccggaggaagcggcgtcgacgcagccg
gaggaggaggaggcgccggaagccgaccaatcggaacggggagaggaggcgggccaatcg
caggccgggcgccagagtcacgtgatcaaaaacgtggatgagattttccacacgattgag
gggttgatgagcaagttgcgccacctgaaggaaatcgagacatcccatcaacagctgtta
aagaccctcagggagccctttgtcggcccggagtcggaggaccaacgctgttgctcggca
accgtctccagaacgccaagtctggaccgtggctcgggagacggcaaagagggaagtcca
gccgagcccaagattcagtcgacaggtttctga
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