Cyclopterus lumpus (lumpfish): 117747501
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Entry
117747501 CDS
T09199
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04217
Necroptosis
clum04622
RIG-I-like receptor signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117747501 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117747501 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
117747501 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117747501 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117747501 (si:cabz01101003.1)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117747501 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C67
117747501 (si:cabz01101003.1)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117747501 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117747501
NCBI-ProteinID:
XP_034412669
Ensembl:
ENSCLMG00005018817
UniProt:
A0A8C3G7J0
LinkDB
All DBs
Position
18:complement(2600817..2608115)
Genome browser
AA seq
985 aa
AA seq
DB search
MSSAHDQVKKRRPPQVFLISTDLKVQDQLDGTILLQRGWICHEQDSGKNRGDSSWVKVLD
NGCMLKIERKYLLEVPTDLNGLLEPVGEPEARLKLLGNPGKLHYLASLPVDSPLWVQIGP
QDELAEADLKYVGPLTRGSSAVLFGVQLKGSAVGMGTSNGSYKGQRLFSCPDACSLFLPV
SHIRPRSWSRNTSSDAPEQARERDRHRSRGGNNPPGNGQNSSSSSTDRPSPQQQHHSRHV
SLHPRRSCSPPQALGVLSRTAESAPLAAQNQVQVRGPASPPRLHVGQRVCFPLETGGVYG
GEVCFFGLLPGRASSGAYVGVLLDVPVGNWGGLYKGEKLCHIPSPLYGLLLPVNKVSSEP
RSHRHNPPRRVSKPLLKPAPPPVTKPGPATPSSSAPKVALMPPSKPGLKPPPLPPPKPTH
RATPPLPLPKPRSLAVSPPAAAADQQPPHTNGALGPPSPLRSPDGSEGAEQEDEEAGPEG
ELEVGSMVEVNDPPLVGVIRWIGPIGGISEPVAGIELDQELSAGTDGSYLGERHFRCPAN
KGLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFADWGSERVEEHTPPSDGDEAADLYDG
WKRGIQGHLNSCYLDATLFSLFSCCSSADWVLFCPSDPETDQDSSQAQDLLRCEIVNPLR
RNGYVCASKTMALRRLLEAGSSDTGFTNQEKDPEEFINKLFQLLRVEPLLKIRSMTRRPQ
EGHLYQLFPPTLPPAPSPPPSPVGAPAPLTSPSPGRMRVASVQALLESSFLHAGLKFVEA
PSCLLLLMPRFGKDFKMFDAISPTLSLDITDLLDDTLRQCSICQAVADWECLQCYEDPDI
TPGHVKQYCQTCNTQVHSHRKRASHTPVNVAVPGGPWSGPLRCTRQRMSLFAVTCIETSH
YVSFVKHGPRPADWLFFDSMADREGGENGFNIPHVKACPEVGCYLGLSEDELGRVDPASL
QESARRLLCDSYMCLYHSPELSLYK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggctcacgatcaagtcaagaagcgccgcccccctcaagtgtttttgatctcg
accgacctgaaggtccaggaccagctggacggtaccattctgctgcagcgggggtggata
tgccacgagcaagactctggcaagaacagaggcgactcctcttgggtcaaggtgttagac
aatggctgcatgttgaaaatagagaggaagtacctgctcgaagtcccgactgacctcaac
ggcctgttggagcccgtaggggaaccggaggctcgcctgaaacttctgggtaatcccggg
aagctgcattatttggcttcattgccggtcgattctccgctgtgggtccagatcggcccg
caggacgagctggcggaggcggaccttaaatacgtcgggccgctcacccgcgggagcagc
gccgtgctgtttggggtgcagctcaagggttcagcggtcggcatgggaaccagcaacggc
tcctacaagggccagcggctcttcagctgccccgacgcctgttccctcttcctcccggtc
agccacatccggccccgcagctggtctcgaaacacctcctccgacgctcccgagcaagcc
cgtgagcgagaccgccaccgctcccgcggcggcaataacccgcccggcaacgggcagaac
agcagcagcagcagcaccgaccggccgagtcctcagcagcagcatcacagtcgccacgtc
agcctccacccgcgtcgatcctgcagccctcctcaggctctgggcgtcctctctcgcacg
gcggagtcggcgcccctcgcggctcaaaaccaggttcaggtccgaggccccgcgtcgcct
ccgcggctccacgtcggccagcgggtgtgcttccccctggagaccggcggcgtctacgga
ggggaggtgtgcttcttcggtctgctgcccggccgggcctcgtcgggggcgtacgtcgga
gtcctgctggacgttcctgtcggtaactggggcggcctttacaagggagagaagctctgc
cacattcctagtcctctatatggactactcctgccagtcaacaaggtttcctcagagccg
agatcccaccgccacaaccctcctcgccgggtcagcaaacccctcctgaagccggccccg
ccccccgtcaccaaaccgggccccgcgaccccgtctagctcggctcccaaggtcgccctg
atgcctcccagcaaaccaggacttaaacctcctccgctgccgccacccaaacccacccac
agggccacgccccctctcccacttcccaaaccccgcagcctggcggtgtcgccgcccgcc
gccgccgccgaccagcagccgccgcacaccaacggcgccctcggcccgccttcgccgctg
aggtcgcccgacggcagcgagggcgcagagcaggaggacgaggaggcgggaccggagggc
gagctggaggtgggctcgatggtcgaggtgaacgacccgccgctcgtcggggtcatccgc
tggatcggaccgatcggagggatttcggagccggtggcaggaattgagctggaccaggag
ctgtctgctggaaccgacggcagttacctcggcgaacggcacttccgttgcccggccaac
aaggggctgttcgtcaagcttcgcaactgcagacgggactccaggtttccggcccccgag
acgcccgtcaatcaagtggagcgatgcaactccatagcctttgcggactggggcagcgag
cgcgtggaggagcacacgccgccttcggacggggacgaggccgcggacctctacgacggc
tggaagagaggcatccagggtcacctgaactcgtgctacctggacgcgacgctcttcagt
ctgttctcctgctgcagttcagcagactgggtcctgttctgtccgtctgaccctgaaacc
gaccaggactccagtcaggctcaggacctgctgcgctgtgagatcgtcaaccctctgcga
cggaatggctacgtgtgtgccagtaagaccatggccttgagacgactgctggaggccggg
agcagcgacacgggcttcaccaaccaggagaaagatccagaagagttcatcaacaagctt
ttccagctcctccgagtcgagccactcctcaagatcaggtcgatgactcggcgtcctcag
gagggtcacctctaccagctcttcccacctacgctccctcccgcgccctccccgcccccc
tccccggtcggtgcccccgcccccctcacctcgccgtcgcccggccgcatgcgtgtcgcc
agcgtccaggcgctgctcgagtcctccttcctccacgccggcctcaagtttgtcgaggcg
ccgtcgtgcctcctgctgctcatgccgcgctttgggaaggacttcaaaatgtttgacgcc
atctcgccgacgctcagcctggacatcaccgacctgctggacgacaccctgagacagtgc
agcatctgtcaggcggtcgctgactgggagtgtctccagtgttacgaggaccccgacatc
acccccggtcacgtcaagcagtactgccagacgtgcaacacacaggtccacagtcacagg
aagcgggcgtcgcacacccccgtgaacgtggccgtccccggggggccgtggtcggggccc
ctgcgctgcacccgccagcggatgtccctctttgccgtgacgtgcatcgagaccagccac
tacgtgagcttcgtgaagcacgggccccgccccgccgactggctgttcttcgacagcatg
gccgaccgggaaggtggcgagaatggcttcaacatcccccacgtgaaggcctgcccagag
gtcggctgctacctcggcctatcggaggacgagctgggcagagttgaccccgcctccttg
caggagtccgcccgccgcctgctctgtgactcctacatgtgtctgtaccacagccccgag
ctcagcctgtacaagtga
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