Cyclopterus lumpus (lumpfish): 117747562
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Entry
117747562 CDS
T09199
Symbol
hnrnpc
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117747562 (hnrnpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117747562 (hnrnpc)
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
hnRNP proteins
117747562 (hnrnpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF4763
Nup35_RRM_2
RRM_5
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
117747562
NCBI-ProteinID:
XP_034412790
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All DBs
Position
18:2272509..2297105
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AA seq
313 aa
AA seq
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MSPLSPKTQRQTSSDLITDPMDPMASSNVTNKTDPRSLNSRVFIGNLNTLLVTKGDVEAI
FAKYGKIVGCSVHKGYAFVQYANERNARNAVVSEDGRMIVGQVLDINLAGEPKPHRSKTV
KRSAGDMYSSSVDLDYDFQRDYYDRMYSYQSRVPPPPPPPLSRAVIPSKRPRVSVSGGGS
RRTKTSFSSSSKTSQRTSRAAVKVDDLQTIKRELTQIKHKVDYLLESLERMEKDHGKKSD
MKSCKPEPGEVSPLHSSTSSKKCDGLKRSMNDSDDEGDLLEDDDEMKSRGREDDEEEPEE
GEDDGDSANGDES
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccattatcaccgaaaactcagaggcagacctccagcgacctgatcacagatcca
atggacccgatggccagcagcaacgtgaccaacaagacggacccgcgctccctcaactcc
cgggtcttcatcggcaacctcaacaccctgctggtcaccaagggcgacgtggaggccatc
ttcgccaagtacggcaagatcgtgggctgctccgtgcacaagggctacgccttcgtgcag
tacgccaacgagaggaacgcccgcaacgccgtggtcagcgaggacgggaggatgatcgtg
ggacaggtgctagacatcaacctggcaggtgagcccaaacctcaccggtcgaagacagtg
aagcgctctgcgggagacatgtacagttcatctgttgatttggactacgacttccagaga
gattactacgacaggatgtactcctaccagtcccgcgtgcctccccctcccccgcccccg
ctgtcccgcgccgtcatcccctcgaagcgcccgagggtgagcgtgagcggggggggcagc
cggcggaccaagaccagcttctcctcgtcctccaagaccagccagaggacctcccgcgcc
gcggtgaaggtggacgacctgcagaccatcaagagggagctcacgcagatcaagcacaag
gtggactacctgctggagagcctcgagcgcatggagaaggaccacggaaagaagtcggat
atgaagagctgcaaacctgaaccaggtgaggtgtcccccctccactcctccacctccagc
aagaaatgtgacggattgaaacggagcatgaacgactcggacgacgagggagatctgctg
gaggatgacgacgagatgaagagcagagggagagaggatgacgaggaggagcccgaagaa
ggagaggacgacggagacagcgccaacggagacgagtcctaa
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