Cyclopterus lumpus (lumpfish): 117747603
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Entry
117747603 CDS
T09199
Symbol
rab39bb
Name
(RefSeq) RAB39B, member RAS oncogene family b
KO
K07925
Ras-related protein Rab-39B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117747603 (rab39bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747603 (rab39bb)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
clum04031
]
117747603 (rab39bb)
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
117747603 (rab39bb)
GTP-binding proteins [BR:
clum04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
117747603 (rab39bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
ATP-grasp_5
TniB
Motif
Other DBs
NCBI-GeneID:
117747603
NCBI-ProteinID:
XP_034412868
Ensembl:
ENSCLMG00005019402
LinkDB
All DBs
Position
18:complement(3313969..3318477)
Genome browser
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatctggctgtatcagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctcatccgccggttcacggagggccgcttcgcccaggtgtccgaccccacg
gtgggcgtggacttcttctcccggctggtggagatcgagccgggcaagaggatcaagctg
cagatctgggacaccgcggggcaggagcgcttcaggtccatcaccagggcttactaccgc
aactccgtgggcgggctcctcctcttcgacatcaccaaccgccgctccttccagaacgtc
cacgactggctggaggaggctcgcagtcacgtccagccccacagcatcgtcttcctattg
gtgggccacaagtgtgacctggaggcgcagcgccaggtaacccgccaggaagcagagaag
ctcgcgggggcttacgggatgcgctacgtggagacgtcggcccgcgacgccatcaacgtg
gagcacgccttcaccgagctgaccagagacatcttcgctctggtgcggtccggcgacatc
accatccaggagggttgggaaggcgtgaagagcgggttcgtccccaacgtcgttcactct
tcggaggaagtgaccaagagtgaccgccgctgtctgtgttga
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integrated database retrieval system
