Cyclopterus lumpus (lumpfish): 117747625
Help
Entry
117747625 CDS
T09199
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117747625 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117747625 (sf1)
Spliceosome [BR:
clum03041
]
Complex A
Other components
Complex A specific factors
117747625 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
117747625
NCBI-ProteinID:
XP_034412896
Ensembl:
ENSCLMG00005022886
UniProt:
A0A8C3GCA2
LinkDB
All DBs
Position
18:14998748..15008661
Genome browser
AA seq
678 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMPAPGPPAAFPAIQAFQPPMPSASFPQ
PIQFNPGAAFPAQAPQQPVVGGGLPKPDFGQKKSRKKSRWSCETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHS
SSQGGGQRSSGHNNNHQQQNRPPWMNSGPTESRNYHSMHGAPGGHGGPHSYPPPMPNMGG
PPMPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMSMMPPPPPPPSNQPPPPPSG
PLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTVSSPGTGTLPPWQQTQQPAASGAQPPPP
MGSPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYAPPPPPPPMDPSNFVTMMGMGVP
GMPPFGMPPAPPPPPPQN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcgcaaatgcaactcctttagggaagttgcaccccagcattggcgctaaa
cgaggatttgacgccgggcctggtgcggggaacgggttgatgccagcaccggggccgccc
gcagcctttcctgctatacaagctttccagcccccgatgccaagcgcatcttttccgcaa
cctattcagttcaatcctggggcagcttttccggcccaagccccacaacaaccagttgtg
gggggcggactgcctaaaccagatttcggccagaagaaatcaaggaagaagagtcgctgg
agctgcgagacgcctgatcagaagacggtcataccgggcatgcccactgttattccccct
ggattgacccgggatcaagaaagagcctatatagtccaactgcagattgaagacctgact
cgtaaactacgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctcc
ccggagcccatctacaacagcgagggcaagcggttgaacacacgcgagtatcgcacgcgg
aagaagatcgaggaggagcgccactccctcatcacagagatggttggactcaacccggac
ttcaagcctcctgctgactacaaacctccagccaccagagtcaatgacaaagttatgatc
ccccaagacgaataccccgaaatcaactttgttggtctgctaatcgggccacgtggtaat
acgctgaagaacatcgagaaggagtgctgtgccaagatcatgatccggggtaaaggttct
gtgaaggaggggaaggttggccgaaaggacgggcagatgctgcccggggaagacgagcct
ctgcatgcgctggtcactgccaacacaatggagaacgtcaagaaagctgtggagcagatt
cgcaacattctgaagcaaggcattgagacgcccgaggatcagaacgaccttcgaaagatg
caactgagggagctcgctagactcaacggcacactgagggaagatgacaacagaatcctc
cgtccttggcagaattctgagccacgcagcatcaccaacaccaccctctgtaccaagtgc
ggtggagccggccacatctcctctgactgcaagtacaccagctcattcgctgcccacaga
gcgacaggcggcgagcctcctcagtcagcccaggacaaagctcggatggacaaagagtat
ctgtccctaatggccgagttaggggaggctccggtccccacctctggtggaggacactcc
agcagccaaggaggaggccagcggtcctcaggacacaacaataaccaccaacagcagaac
cggcctccctggatgaactctggtccgactgagagcaggaactaccatagcatgcacgga
gcacctgggggccacggaggaccccacagctatcctccccccatgcccaacatgggaggc
cccccaatgccccccaaccccaatggcctgcctcccccttggatgcagccccctcctccc
cccatgggccagggaccaggacctcatggacaccccatgggcctgctgccacctccaatg
agcatgatgccgcctcctcctcctccccccagcaaccagccaccacctcccccctctgga
cccttgccaccatggcaacagcaggctccacctccccctcccaccagcagcatggcaacc
agtacgccgctaccctggcaacagaataccaccaccgtgtccagccctggcaccggaacc
ctgcctccatggcagcagacccagcagcctgcagcctccggagcccagcccccaccaccc
atgggatccccatcgatggtgccgcctccccctggtgtccagcccccgttacctccgggt
gcccctcctcccccccctccacctcctccaggctcaactggcatgatgtatgccccacca
ccgccaccaccacccatggacccttccaactttgtcactatgatggggatgggggtaccg
ggcatgcccccctttggcatgccccctgccccacctccccccccaccccagaattaa
DBGET
integrated database retrieval system
