Cyclopterus lumpus (lumpfish): 117747635
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Entry
117747635 CDS
T09199
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum02010
ABC transporters
clum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117747635
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117747635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117747635
Transporters [BR:
clum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117747635
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
117747635
NCBI-ProteinID:
XP_034412914
Ensembl:
ENSCLMG00005006114
LinkDB
All DBs
Position
18:complement(9523106..9645504)
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AA seq
2241 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFVILVWVRSTNKPLHKGQCHYPNKA
MPSAGVLPWLQGMMCNINNPCLNSPTPGETPGQVNNFNSSIIAGMLIELQTLLVNRSILS
NAQLLADDLDQWESILSQANPGDAQPLILRSILRDNETFSTHLKENLSLPSTVVQSLMNA
EIKLNPMVGIPRPGNLKSILCEGTDLDEYIQFSSRAEKEAFQNVSCSRDPQQLNNAQQVL
LQNLDARKVLSEVPSSLDPNVTDTVTLVGKTIQHALPVIEEMDRLQNSMIFKAAGSLDFQ
KNMIGSINMLLCGKQPDISLRSTRQMDNETSVFITSNSSDAFCQTLVDTLEGTPGLRYIW
STFKQLLQGKVLYTPDTPAVRLMVKEANSTFNALAMLKELTDLWDELGPRVWDFLQNSRQ
VNALRALLANPVFAAVLNQSVNSTGWTGELLANFLYNGPPEDRPPGMPPYDWRNAYNTTS
EILKLLSSFLGCLNLNKFEAVPTESHLVSRAQELLKNDTFWAAVVFENLQPNSSHPSPYV
KYKIRMDIEDAERTNKVKDRLWSPGARDNAFNDMRYIWGGFAYLQDMMDHGIIRVQTSKT
QPLGVFAQQMPYPCFVDDPFLRFLASSLPLYMTLAWIYSVAMIIKGIVAEKEARLKETVR
IMGLRGSIYWLSWAVSSLLPLAFSAILLCLILKYGKVLQYSDPSVIFVFLLVFCLATITQ
CFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVMAFQAKVAVSLLSCVAFGYGCE
NFAKFEEQGIGIHWYNINKSPEDGERYTFIVSIIMMLFDAAFYWVLTWYIENVFPGQYGI
PKPWYFPFTASYWCGTASAIDIDPGVLKNSTEHNEYLENPSPNMKAGVSVRNLVKIYKTG
KKLAVDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDILTDMDSI
RKYLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVTIEMDQIIKDVGLPHKRKELAKN
LSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMD
EADILGDRIAIISHGKMRCCGSSLFLKKRFGSGYYLTLVRDGNEKMTAQRNGIIHHQAKE
EEDCPSRNSSLDDGIGSQIWDNCDPSDLTALDQIVRRHVPEAVFLESIGQEITYILPYGG
ARDGTFALLFQGLDLGMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPTTKELLVRDC
RRGSHTTKRNSIASVHMKTEPVSGRSDLKERFTSKVEDFKKNASVNGKGSTVITGWELIR
RQFLALFIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLIIPPFTEYPSLELQPWMYDL
PQTTFYSNDGPDNVEVSKVVETLVNKPGFGSRCMNGDPIPTLPCSSTGSDWFTPSVDQSV
TDIFLNGNWSMSNPSPPCQCSTPKRTIMFPDCPPGAGGRPPSQRIQNTTDTLLNLTGRNM
TDFLVKTFEHSGKTRYGGISVGGVNSQVRMSEAAIEASFRDLKDLFSSSQDNLTDQILQK
SATLLKKLGTRDNLKVWFYNEAWHGMASFLSVSNNAILRGNLPTGQDPSQYGISVSNHPL
NLTKEQLSFVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPA
VYWLANFAWDMCNYIIPCLIVIVIFLCFQQKAYVSPPNLPALILLLILYGWAITPMMYPA
SFFFSVPSTAYVVLTCINLFIGINGSIATFVLELFDDDNVSRINDIVKNVLLIFPHFCLG
RGLIDMSKNQAMATLFSSFGEDRFKDPLSWDMVGKNLCAMSIQGVVMFTTTILIQYKFFC
KPRLISGKSLSSEEEDIDVARERKRLYDGKAQNDLLRICDLTKVYSRKSSPAVDGLCVGV
AAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIQTEMSEVHQNMGYCPQFDA
IDDLLTGREHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSSKSAGTYSGGNKRKLSTA
IALIGCPQVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAI
MVNGRFKCLGSIQHLKSRFGDGYTVIVKVGGSSPALKPVEDFVQQSFLGSVLKETHHNTL
QYHLPYTQGALANIFSQFTRHQQRLGVEDYSVSQTTLDQVFVNFARHQHGEENSQAYDNA
VDTSDEMPMQCVKTSQEAEMV
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagttatatggcctctgtttctcttcgtcatactggtg
tgggtgcggtccaccaataagcctcttcataaaggccaatgccactacccaaataaagcc
atgccgtcggctggcgtgcttccctggcttcaaggtatgatgtgtaacatcaacaatccc
tgtttgaactctccaacgccgggggagacgccaggccaagtcaacaacttcaacagctcc
ataattgccgggatgttgatagagctgcaaaccctcctcgtgaacagatctattctcagc
aatgcacagttgctggcagatgacctcgaccagtgggagtcaatcctgtcacaggctaac
cctggtgatgctcaaccactgatcctaaggagtattctcagagacaatgaaacgttctcg
actcatctgaaagagaatttatcgctgccatcaacggtggtccaaagcctcatgaatgct
gagattaaactcaatccaatggtgggcatcccaaggccaggcaacctgaagagcatcctg
tgtgaagggacagacctggacgagtatatccaatttagcagccgagctgaaaaagaggct
tttcaaaatgtcagctgctcccgcgatccacagcaactgaataatgctcagcaagtactc
ctgcaaaacctggatgcgaggaaagtgctttctgaggtaccttcatctttggatcccaat
gtaacagacacagtcacactggtggggaaaaccattcaacatgcattaccagtgattgaa
gagatggacagattgcagaactccatgatctttaaggctgctggttctttggatttccaa
aagaacatgattggcagtatcaatatgctcctttgtggaaagcagccagacatcagttta
cgctcaactagacagatggataacgagacgtctgtctttattacaagcaacagttccgat
gctttttgtcagactcttgtcgacaccctggagggcacacctggtctgcgctacatttgg
agcaccttcaagcagttattgcaagggaaagtcctctacacacctgatacacctgctgtc
cgcctcatggtgaaagaggcaaatagcacattcaatgccctggctatgcttaaagagctc
accgatttgtgggatgaactcgggccacgtgtctgggattttcttcaaaacagccgccaa
gtcaacgcattacgggctttgctggcaaatccagtgtttgctgctgtcctcaaccagagt
gtcaacagcacgggatggaccggcgagctgttggccaacttcctgtacaacgggcctcca
gaggatcgtccacccggcatgccgccctacgactggcgaaacgcttacaacaccacttcc
gaaatcctgaagcttctctccagcttcctcggttgtttaaacctgaataagtttgaggca
gtgcccaccgaaagccatctggtgagcagagcacaggagcttctgaagaacgatacgttc
tgggctgccgttgtctttgaaaacctacagcccaactccagccacccctctccgtacgtc
aaatacaaaatccgcatggacattgaagatgcagagcgtaccaacaaagtgaaagacagg
ttatggtctcccggggctcgagacaatgcctttaacgacatgcgctatatatggggaggc
ttcgcctacctgcaggacatgatggaccacggtattataagagtacaaacgtcaaagact
caaccacttggcgtttttgcacagcaaatgccatacccctgcttcgtggatgacccgttc
ctccggtttctggcaagctcgctccccttatacatgactttagcctggatatactcagtg
gccatgatcattaagggcatcgtcgcagagaaagaggcgaggctgaaggagaccgtgagg
atcatgggcctcagaggttccatctattggctgagctgggcagtgtccagtctgctgccg
ctggccttcagtgctatcctcctttgccttatactgaagtatggcaaagtgctgcaatac
agcgacccctcggtaatctttgtcttcctgctggtgttctgcctggccaccatcactcag
tgcttcttcattagcgtcttcttctctaaggccaatctagcagcggcgtgcggtggcctc
atctactttgtcctctacctgccgcacctcctttgctacgcctggagggacgtcatggct
tttcaggccaaggttgcagtgagtttgttgtcatgtgtggcctttggctatggctgtgag
aactttgccaagttcgaggagcaaggcatcggtatccactggtacaacatcaacaagagt
ccggaagatggagaacgctacaccttcatcgtgtccatcatcatgatgctctttgatgct
gccttttactgggtgctcacctggtacattgagaatgtctttccaggccaatatggaatc
ccgaagccgtggtacttcccattcactgcatcctactggtgtgggacagcttcagcgatt
gacattgaccccggcgtgctgaagaactcgactgaacataatgagtatctggagaatcca
tcacccaatatgaaagcaggggtctcagtccgcaatctcgttaaaatatacaagaccgga
aagaagctcgctgtggacggactgagtatggacttctacgagaatcagatcacatctttt
cttggccacaatggagccggaaaaacaaccacaatgtcaattctgacaggactgttccca
cctacatcaggaacagctctcatcaacggatatgacatcctcactgacatggacagcatc
cgaaagtacttgggaatgtgcccacagcacaatgtcttattcaatgacctgacagtggag
gagcatatctacttctacgcccggttgaaaggacgcagccgcgacgaggtgacaattgag
atggaccagataattaaggatgtcggtttaccacataagcggaaggagcttgcgaagaac
ttgtcaggtgggatgcagaggaagctgtccgtggctatagcatttgtcggcggctcaaaa
gtcgtcatcttagatgaacccacagcaggagtggacccctatgcccgaaggggtatctgg
gaactgctgttaaaatacaaacaaggtcgcaccataatattgtctacacaccacatggat
gaggcagacatcttaggggatcgcattgccatcatctcgcacggcaagatgcgttgctgt
ggctcctccctcttcctaaagaaacgttttggcagcggctactacctcactctggtccga
gatgggaatgagaagatgacagctcagcgtaatggtatcatacaccatcaggccaaagag
gaggaagactgtccttcgaggaacagcagcctggatgatggcatcggcagccagatctgg
gacaactgtgatccctcagatttgacagctctggatcaaattgtgcggcgccatgtccct
gaggcggtcttcttggagagcatcggtcaggagatcacttacatactgccttatggcgga
gccagggatgggacctttgctctgttgttccaagggcttgacctgggcatggctgacctt
ggcctgaccagctacgggatctctgacaccacgctggaggagatatttcttaaagtggca
gaagatactggagtggatgcagaaataccaacaacaaaggagctgttggtgagagactgc
agaagaggctcccacacaaccaagcggaacagcatcgccagcgtccacatgaaaacagag
ccggtctctggaaggagtgacttaaaggaaaggttcacaagtaaagtggaagacttcaag
aagaacgccagtgtcaatgggaagggatccacggtcatcaccggttgggagctgatcagg
aggcagttcctggcgctttttatcaagcgcttccaccacgccagaaggagccgcaaggga
ctcattgcccaggttgtcctgcctgctgtgtttgtgtgcctgtctctgatcttctcgctc
atcatcccaccattcactgaatatccgagtctggagctgcaaccctggatgtatgatctg
cctcaaaccaccttttacagcaatgatgggccagataatgtggaggtgtctaaggtggtg
gaaaccttggttaacaagcctggctttgggagtcgctgcatgaatggagacccaataccg
acgttaccttgttcttccactggctcagattggttcactccatccgtggatcagtctgtc
actgacatctttctcaatgggaactggagcatgtctaacccctcccccccctgtcagtgt
agcacgcccaaacggacaatcatgtttcctgactgtccacctggtgcaggagggcgccct
ccatctcagaggatccagaacacaacagacacattgttgaatctaactggacggaacatg
acagacttcttggtcaagacttttgaacactcgggtaaaacaaggtacggcggcatctct
gtcggaggtgtcaactcccaagtccgtatgagcgaggcagcaatcgaagcttcattcagg
gatctaaaagacctattcagttcctctcaggataatttgactgaccagatcctccagaag
tctgcgacgctgctgaagaagctgggaaccagagacaacctaaaggtgtggttctacaac
gaggcatggcacggcatggcgtccttcctcagtgtgtcaaacaacgccatcctgagggga
aatctgccaacaggacaggatcccagccagtacggcatctctgtgtccaatcaccccctc
aacctcaccaaggagcagctctcctttgtagccatggccacaacctctactgacgtggtg
gtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtcctcttcctc
atccaagagagggtgaacaaagccaaacatctgcaatttgtcagtggagtaaacccagct
gtctattggctggccaattttgcatgggacatgtgtaactacatcatcccatgcttgatt
gtgatcgtgatcttcctctgcttccaacaaaaagcctacgtttcacctcctaacctgcct
gctttgattctgctgcttattttgtatgggtgggccatcacccccatgatgtaccccgcc
tccttcttcttcagcgtgcccagcacggcctacgtggtgttaacctgcatcaacctcttc
attggtattaacggcagcatcgcaacctttgttttggagctctttgacgatgacaatgtc
tcccgcatcaatgacattgtgaaaaacgtgctgctcatattcccacatttctgtctgggc
agaggcttaattgacatgtccaagaaccaggcgatggccaccctcttcagcagttttggg
gaagaccgtttcaaggacccactcagttgggacatggtgggaaagaacctttgtgcgatg
tccatccagggagttgtcatgtttaccaccacaatcctcatccagtataagtttttctgc
aaaccaaggcttatttcaggaaaatcattgtcttcagaggaagaggatattgatgttgct
cgggaacgcaagcgcttgtatgacggcaaggcccagaacgaccttctgaggatctgtgac
ctcactaaggtatactctcggaagagcagccctgctgtggacgggctatgtgttggagta
gctgccgcagagtgtttcggcttgctgggaatcaacggggctgggaaaaccaccacgttc
aagatgctgacaggagacatcccggtctccagtggagaggccttcctaaatggatacagc
atacaaacagaaatgagcgaggtgcaccagaacatgggctattgtccccagtttgatgct
attgatgacctgctgactggacgagagcaccttgagttttacgccagattacgaggggta
ccagaaaaagaggtcaccatggtggccgagtgggggatccagaaattggggctggtcaaa
tattccagcaagtcggcaggaacctacagtggtgggaacaaacgcaaactttctacagcg
atagccctgatcggttgtccgcaagtaattttcctggatgaaccaacgactgggatggat
cccaaagccaggcgcttcctgtgggactgcatcctcagcgtcatcaaagagggacgctca
gtcattctcacatcacacagtatggaggagtgtgaagccctgtgcacacgcatggccatc
atggtcaatggacgcttcaagtgtctcggaagcatccagcatctcaagagcagatttggt
gatggctacacggtgattgtgaaggttggtggctcttctcctgcattgaagccagtagag
gacttcgtccagcagtcgttcctgggcagcgtcctgaaggagacgcatcacaacactctg
cagtatcatctcccgtacacacagggagctttggccaacatcttcagccagttcactcgc
catcagcagaggctgggtgtggaggactattcggtgtcccagaccacgctcgatcaggtc
tttgttaactttgcgaggcaccagcacggggaagagaactctcaggcctatgacaacgca
gtggacacttcagatgagatgccaatgcagtgcgtgaagacctcccaagaagcagagatg
gtgtaa
DBGET
integrated database retrieval system
