Cyclopterus lumpus (lumpfish): 117747638
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Entry
117747638 CDS
T09199
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117747638
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117747638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747638
03036 Chromosome and associated proteins [BR:
clum03036
]
117747638
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117747638
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117747638
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
117747638
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
117747638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
117747638
NCBI-ProteinID:
XP_034412917
Ensembl:
ENSCLMG00005004876
LinkDB
All DBs
Position
18:complement(7161068..7174000)
Genome browser
AA seq
1265 aa
AA seq
DB search
MSSAGTVESARPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDDAKGKNDGTVQ
GKRYFTCEENHGIFVRQSQLQVVEDGSGATSPDTPESGTTKIPRQKDIPETPRTSKQTPV
SVKKWNTPSRLTPATSLPSLSGRHSGRSSLMASRESLTSSLSGDVSEAGLTPHQGALAAP
VIPQPSGSSAAMAAPVPATPSKVEPAIFKQDEESMRAQVKDLEEKLETLKMKRTEDKVKL
KELEKYKIQLEQLQEWKTKIQEQQAELQKQLKEAKKDAREAQESKDRYMEEMSDTADAIE
MATLDKEMAEERAESLQLEGETLKEKVEELSMDLEILRHDISEKGSDGAASSYHVKQLEE
QNGRLKEALVRMRDLSTSEKQEHVKLQKQMEKKNTELETLRTQKEKLQEEVKQAEATIDE
LKEQVDAALGSEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENARETEMEL
REQVDLSAAKVREAEKRVEAAQETVADYQQTINKYRDLTASLQEANIELISQQNVNAEVQ
QPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQSNRQVSLLTSFMPDSFLRHGGDHDCI
LVLLLIPRLICKSELISKQAQEKFDLNGNLAQGTGLRGPPGEQRSFASGLVYSLNLLQAT
LHKYEQALNTCSVEVFKRMGTLYSEMNFHERSLDYFIDLLHKDQLDETVQVEPLTKAIKY
YQQLYSVHLADHTEDCTVQLADHIKFTQNVLDCMGVEVARLRAFMAAGQESSVLAVLLKD
LDTSCSDIKQFCKKIRRRMPGTDVAGVPAALNFGPQVSESLTECRRQQTRVVAVLQEVAA
AGAQMIAPLAEQEGLNALKLEDIAYKAVEQVYGSQGLNGPECLRQSCSSIITTMNKMATA
MQEGEYDADKPQAKTHPVEMRASTVRAEMTDAEGLGVKLEDRETVIKEVKKSLKIKGEEL
SEANVRLSLLEKKLDTSTKDADERVEKIQTKLDENLALLKKKEKEFEETMDALQADIDQL
EAEKAELKQRINNQSKMTIEGLRATPASGIASIVQASAGAGLPPSLAGPVQVVDSPLLRQ
QVEAQRMGIKHLKNENNRLKAEKMRAQLASLPPLCPPKLPKASKDTSMPPDGLNTGIYRR
TDQLLATLLKLSSEVKVVDITGKTAVSAGAQLLEQTARLQYLSDALDKLKGEVAEHVVSS
QSGAKASSDFATFPLSCFVKAKEEKQGGTVFVGRVAIPCTRGQEQVHRLILSQQQLQKVH
RLLMT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaggaacagtggagtctgccagacctccaaagattggctctatagtggag
gtgactgggaagggtcagcgtggtactgttgcctatatcggtgccaccctctttgcctct
ggaaaatgggtgggcgtcatactggatgacgccaagggcaagaacgatggcactgtgcag
gggaaacgctacttcacctgtgaggaaaatcacgggatatttgtcagacagtcccagctc
caggtggtggaagatggctccggcgcaacctcaccagatactcctgaatcaggcactaca
aagatacccagacagaaagacattcctgagactccccggacatccaagcagacacctgtg
agcgttaagaagtggaacactccaagtcgtctcacacctgccacctccctcccctccctc
tcgggacgtcactccggtcgctccagcctcatggcatctcgtgagagcctgacatcctct
ctgtctggtgatgtcagtgaagcaggcctgaccccccaccaaggtgcactggcggctcct
gttatacctcagcccagcgggtcgtctgcagcaatggcagccccggtcccggctactcca
agcaaggtggaacctgccattttcaagcaggatgaggaatcaatgcgagctcaggtcaag
gacctggaggagaagctggaaacactgaagatgaagcggacagaggacaaagtcaagctg
aaagagctcgagaaatacaagatccagctggagcagcttcaggagtggaagactaaaata
caggagcagcaggctgagctgcagaaacaactcaaagaggccaagaaggacgcccgtgag
gcacaggagtccaaggaccgttacatggaggagatgtcagacacggcagacgccatagaa
atggccacacttgacaaagagatggctgaagagcgagcagagtccctgcaattggagggg
gaaacgctgaaggagaaagtggaggagctctccatggacttggagatccttagacatgac
atttcagagaaaggctcagatggagctgcctcaagttaccatgtcaaacagctggaggag
cagaatggcagactgaaggaggcgttggttcggatgcgtgacctgtctacgtcagagaag
caggagcacgtgaagctgcagaagcagatggagaagaagaacactgagctggagactctg
aggactcagaaggagaaactacaggaggaggtcaagcaggccgaggctactatcgatgaa
ctcaaggagcaggtggatgctgctctggggtcagaggagatggtggagaccctgacggag
aggaacctcgacctggaggagaaagtccgagagctgagagaaaccgtcactgatttggag
gccatcaacgagatgaacgatgagctccaggagaacgcccgggagacggaaatggagctg
agggagcaggtggatctgagtgcagcaaaggtcagagaggctgaaaaaagggtggaggct
gcccaggagactgtagcagattaccagcagaccatcaacaaatacagagatctcactgcc
agcctacaggaggccaacatagagctgatcagccagcagaatgtgaatgctgaagttcag
caaccgcctgctgaactatttgacttcaagattaagtttgcagagaccaaggcatatgcc
aaggccattgagatggagctgaggaaaatggaagtggcccagtctaacagacaggtgtcc
ctcctcacttccttcatgccggactccttcctccgccatggtggagatcacgactgtatt
ctggtccttctgctcatccccaggctcatctgcaaatctgagctgatcagtaaacaggcc
caggagaagtttgacttgaatgggaacttggcccagggaacggggctacgaggacctcca
ggagaacagcgcagttttgcgtcaggactggtctactccctcaacctgctgcaggccact
ctgcacaaatatgaacaggctctgaatacctgcagcgtggaggtttttaagcgcatgggt
acactctactctgaaatgaacttccatgagcgctctctggattatttcatcgacctgctg
cataaagatcagctagatgagactgttcaggtggaacctctgactaaggccatcaagtac
tatcagcaattgtacagcgttcatctggcagatcacactgaagactgcaccgtgcagctg
gctgaccacattaagttcacccaaaatgtcctggactgcatgggagtggaggtagctcgt
ctgcgggccttcatggcagcaggtcaggagagctctgtcctcgctgtccttctcaaagac
ctggacacttcctgctccgatatcaaacagttctgtaagaagatccgccgccgcatgcct
ggaacagatgtagctggagtacccgctgctctcaattttggaccacaggtgtctgagtcg
ctgacggagtgcaggcgccagcagacccgtgtggtggctgtgctgcaggaagtggctgca
gctggagctcagatgatcgctccgctggcggaacaggaggggctcaacgctctcaaactg
gaggatattgcctacaaggctgtggagcaggtgtatggttctcaaggcctaaacggccca
gaatgtctgcgtcagtcctgcagctccatcatcactaccatgaacaagatggccacagcc
atgcaggaaggagagtacgatgctgacaaaccacaggccaagactcatccagtggagatg
agagcatccactgtcagggccgagatgaccgacgctgagggtctgggagttaaacttgaa
gatagagagactgtcatcaaggaggtcaagaagtccctgaagatcaagggggaggagctg
agtgaggctaacgtccgtctgagcctgctggagaagaagctggacacctccaccaaagac
gcagatgagcgggtggagaagattcagaccaaactggacgagaacctcgccctgctaaag
aagaaagaaaaggagtttgaagagacaatggatgccctgcaagctgatatcgaccagctg
gaggcggagaaggcggagctaaaacaacgcatcaataaccaatcgaagatgaccatcgaa
ggcctgagagccacgcctgcctctggaattgcctccattgttcaggcatctgcaggagca
ggtcttcctccatccctggctggaccggtgcaggtggtggactcccctctcctgaggcag
caggttgaagcccagagaatgggcattaaacacctcaagaatgaaaacaacagactcaag
gcggagaagatgagagcccagctggcctccctgccgccactctgccctcccaaactacca
aaagcttcaaaggacacttccatgccaccagatggactaaacacaggcatctatcgcagg
actgaccaattgctggctaccctgctcaagctgagttcagaagttaaagtggtggacatc
acaggaaagacagcagttagtgccggtgcacagctgctggagcagacagctcgactgcag
tacctcagtgatgctctggacaaactcaagggagaagtagctgaacatgttgtctcaagt
cagtctggggcaaaggcttcctctgactttgccaccttcccattgtcctgttttgttaag
gccaaggaagagaagcagggcgggactgtgtttgtaggacgtgttgccattccatgcacc
cgtggacaggaacaagtccaccgcctcatcctatcacagcagcagctgcagaaagtgcac
cgcctcctcatgacctaa
DBGET
integrated database retrieval system
