Cyclopterus lumpus (lumpfish): 117747647
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Entry
117747647 CDS
T09199
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2
KO
K15516
fragile X mental retardation protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117747647 (fxr2)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117747647 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
117747647 (fxr2)
mRNA cycle factors
Stress granule specific factors
117747647 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
DUF150_C
KH_2
Motif
Other DBs
NCBI-GeneID:
117747647
NCBI-ProteinID:
XP_034412939
Ensembl:
ENSCLMG00005012677
UniProt:
A0A8C2ZZM8
LinkDB
All DBs
Position
18:13865979..13881857
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AA seq
675 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGYIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPAEYQKEIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPLNPNSP
SSRSSFHKVPIPVPEDLRDICENDNIHKEFRKAIGANCIFYSTQTHKLIVLSTNETTVKR
ASLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIGSHGAN
IQQARKVAGVTAIELEEESCTFRIYGETPEAVKQAREFLEFKEDFFQVPRNLVGKVIGKS
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEGVRQGASRDDTANSKEGLVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPANRTGGPGVEREKGYLTDE
STNSLHTSRTYGGRGRGRRASNSQYSGYGTNSELSNASESEDVSEREQRPRGIGGDERGS
RRGGRGRGSISGRGRGGPTSKPSNSISSVLKDPDSNPYSLLEGEGELADADNSEGMGGDR
RRRSRRRRNDQEPSVMDAATESDGQAGPSENGLDDEARPQRRNRSRRRRNRGNRPEGGSA
SRDRQPAESVTVADYISRAESQSRQNLPQKENHGGPEPKENGTSATKDEQTPSKGSPSKG
MTSASETLTLVNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggctcgaatggggccttctacaagggttacatc
aaagatgtccacgaagactcgctcacaattgtttttgaaaacaactggcagccagagaga
cagctgcccttcagcgacgtgcggttgcctcctccagccgaataccagaaggagattggt
gaaggagaggaggtggaggtttactcgagggccaacgaacaggagccatgtggctggtgg
ctggcccgagtccgtatgatgaagggagagttctatgtgatagaatacgcggcgtgcgac
gccacatacaacgagattgtcacagcggagcgcatcaggcccctcaaccccaacagccct
tcctctcgaagctccttccacaaagtccccatccctgtcccagaagacctgagggacatc
tgtgaaaatgacaacattcacaaagagttccggaaagcaatcggagccaactgcatcttc
tacagtacccaaacacacaaactcattgtgctgtctacaaatgaaaccacagtaaagcgt
gcgtctcttctgagcgacatgcatttccgcagcatccgtaccaagcttatgcttatgtcc
cgcaacgaagaagccaccaaacatttggagacaagtaagcagttggcatcagcataccag
gaggaggtgaaggtcagggaggacctgatgggcctagccatcggctcacatggtgccaac
atccagcaggcaagaaaggtggccggtgtcacagcgatcgagttggaggaggaaagctgc
acatttaggatctatggagagaccccagaggcagtaaagcaggctagagagtttctagaa
ttcaaagaagacttctttcaggtacccaggaaccttgtaggcaaagtcatcggcaagagt
ggcaaagtcattcaggagattgtagacaagtcgggcgtggtccgtgtgcggattgaggga
gacaacgacaaaaagcttccccgggaggagggagttcggcagggggcaagcagagacgac
acggccaacagcaaagagggcctggttcccttcgtgtttgtgggaactaaagagaacatc
agcaatgctcaggctctgttggagtaccatgtgtcctacctccaggaagtggagcagctg
cgcctcgagcgtctccagattgacgagcagctccgtcagatcggggttgggtaccgtgcc
cccgctaatcgaaccgggggccccggtgttgaacgggagaagggctacttgacagatgag
agcaccaactcacttcacacctctcgcacctatgggggccgcggcagaggccgtagggcc
tcgaacagccaatactctggatatggcacaaactctgaattgtccaatgcttctgaatcg
gaggacgttagcgagcgagagcagcggccccgtggcattggtggagacgagagaggctcc
cggcgaggcggcaggggccgaggctctatctcaggacgaggccgtggggggcccacgtcc
aagccttccaactccatcagctcagtgctgaaggacccagacagtaacccatactccctg
ctggagggtgagggagagctggctgacgcagacaatagtgagggcatgggaggagaccgc
cgcagacgctcccgtcgccgccgcaacgaccaggagcccagcgtgatggacgctgccacg
gagtcggacggccaggccggccccagtgagaacggactggatgatgaggcgcgacctcag
cgccgcaacagaagccgccgccgtcgtaatcgtggcaaccgcccagagggaggttcggcc
agccgtgacagacagccagctgaaagtgtgactgttgcggactacatttcccgtgctgag
tcccagagcagacagaacctgccacagaaggaaaaccacggtggtcccgagcccaaggag
aacgggaccagcgccactaaggatgagcaaacaccctccaagggttcccccagcaaaggc
atgacttcggccagtgagaccctgaccttggtcaacggggtctcgtaa
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