Cyclopterus lumpus (lumpfish): 117747654
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Entry
117747654 CDS
T09199
Symbol
cul4a
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03420
Nucleotide excision repair
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117747654 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
117747654 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117747654 (cul4a)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117747654 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117747654 (cul4a)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
117747654 (cul4a)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117747654 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117747654 (cul4a)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117747654 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
117747654
NCBI-ProteinID:
XP_034412956
Ensembl:
ENSCLMG00005000175
LinkDB
All DBs
Position
3:complement(10919910..10927922)
Genome browser
AA seq
805 aa
AA seq
DB search
MLPSKDHRLNKEFVSPTVNKQAFEPPAVHSNLVKHLDHTAVSQRANLIMAEDTRQDKRAS
FSAITEHNTNGMARTSAVASSKSGASKKLVIKNFKDRPKLAENYTEDTWLKLRDAVGAIQ
NSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIKQFREESLDNLSFLKR
MNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDSAVQKRTVD
GILEQIELERNGETVDRSLIRSLLGMLSDLQVYKDSFEERFLVETNRLYAAEGQRLTQER
DVPEYLHHVAHRLEEENDRIMSYLDQSTQKPLISCVEKQLLGEHITAMLQKGLRILLDEN
RVAELALLYQLFSKVKGGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMVQDLLDFKDKMDN
VAQSCFTRSEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATEEELERILD
KIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGM
FKDMELSKDIMIQFKQYIQNQSEPSNIELTVNILTMGYWPSYIPMEVHLPPEMVKLQEVF
KLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSMEEIR
AATGIEEEELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKHKLFRIKINQIQM
KETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPVKPGDLKK
RIESLIDRDYMERDKETPNQYHYVA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctccaaagaccaccggttaaacaaagagtttgtgtcgccgacagtaaataaa
caggcgtttgaaccacctgccgtccacagtaacttagtaaaacacttggaccatacagcg
gtaagccaacgtgctaatctgataatggcagaggacacccgacaggacaagagagccagc
ttctccgctataacggagcacaacaccaacgggatggccaggacctccgctgtggcctca
agcaaaagtggcgcctcaaagaaattagtgatcaaaaatttcaaagacaggccaaaatta
gcagaaaactatactgaggacacgtggctgaagctacgagacgcagtgggtgccatccag
aacagcacgtctatcaagtacaatctggaagagctctatcaggcggtagaaaacctctgt
tcgtataaagtctcgcccacgctgtacaagcagctacgtcaggtctgtgaagatcatgtg
caagcccagatcaaacagtttagagaagagtctttggacaacctttccttcctgaagcga
atgaatcgctgctggcaggaccactgcaggcaaactataatgatacgcagtatctttctc
ttcctggaccgtacctatgtgcttcagaactccctgctcccctccatctgggacactggg
ttggaattgtttcgtacccacattgtgagcgacagtgcagttcaaaagcgcacagtagat
ggcattctggagcagatcgaactagagcgaaatggagagacagtagaccgcagtctgatc
aggagcctgctgggcatgctgtcagacctacaggtttacaaagattcctttgaggagaga
tttttggttgagaccaatcgcctgtatgcagcagagggacagcgattgacgcaggagaga
gatgtgcccgagtacctgcaccatgtggctcatcggttggaggaagagaatgatcgtatc
atgagctacctcgaccagagcacgcagaagccacttattagctgtgttgagaaacagctt
ttaggagaacacattactgcaatgctacaaaaaggtctgaggatcctgctggatgagaat
cgagtggccgagctggccctcctctaccagctcttcagcaaggtgaagggaggactcccc
actctgctgcagttctggagagattacataaagtccttcggtggagagattgtatgtacc
ccagagaaagacaaggacatggtgcaagacctgctggactttaaggacaagatggacaac
gtggcacagagctgctttacgcggagtgagggattcatcaatgccatgaaggaggccttt
gagaccttcatcaacaagaggcccaacaaacctgctgaacttattgctaagtatgtggat
tcaaagttaagagccgggaacaaagaggctacagaggaggagctggagagaatcctggat
aagataatgataatcttccgtttcatacacggaaaagatgtgtttgaagctttttataag
aaggacttggccaagcgcctgctggtcggcaagagtgcgtctgttgacgctgaaaagtcg
atgctctcaaagctcaaacacgaatgcggagcagcatttaccagtaagctagaggggatg
ttcaaggacatggaactgtccaaagacatcatgatccagttcaaacagtatatacagaac
cagagcgagccaagcaacatagaacttactgtcaacatcctcacgatgggttactggcct
tcgtacatacccatggaggtccacttgcccccagagatggtaaaactccaggaggtgttc
aagctgttctacctgggcaagcacagtgggaggaagctgcagtggcagcccacactgggc
cacgctgtgctgaaggcggagttcaaagagggtaagaaggagctgcaggtctcgctgttc
cagacactggtgctgctgatgtttaacgagggagaagagttcagcatggaggagattcgc
gctgccactggcatagaggaggaagagcttagacgcactctgcagtccctggcctgtggt
aaagcacgcgtcctcaacaagaaccctcgagggaaagacgtggaagatggagatcgtttc
aatttcaacaatgattttaaacacaaactgttccgcataaaaatcaaccagattcagatg
aaggaaacggtagaggagcaggtcagcaccacagagcgtgtgtttcaagaccggcagtat
cagatcgatgctgctgtggtgcgcatcatgaagatgagaaagaccctcagtcacaacctt
ctggtatcggagctctacaatcagctgaagttccctgtaaagccgggtgatctgaagaag
cggatcgagtcgctcatagacagagactacatggaacgtgataaggagactcctaaccag
taccactatgttgcctga
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