Cyclopterus lumpus (lumpfish): 117747688
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Entry
117747688 CDS
T09199
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03272
Virion - Hepatitis viruses
clum03273
Virion - Lassa virus and SFTS virus
clum04140
Autophagy - animal
clum04142
Lysosome
clum04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117747688 (lamp1a)
03272 Virion - Hepatitis viruses
117747688 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117747688 (lamp1a)
04142 Lysosome
117747688 (lamp1a)
04140 Autophagy - animal
117747688 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747688 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117747688 (lamp1a)
04090 CD molecules [BR:
clum04090
]
117747688 (lamp1a)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117747688 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117747688 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
117747688 (lamp1a)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117747688 (lamp1a)
CD molecules [BR:
clum04090
]
Proteins
117747688 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
117747688
NCBI-ProteinID:
XP_034412977
Ensembl:
ENSCLMG00005000056
LinkDB
All DBs
Position
3:complement(10913705..10918937)
Genome browser
AA seq
416 aa
AA seq
DB search
MRLSHAVAALIVAWFADFGCIQAVTLNVTEGNTTCIKADLSATFSITYNTSSSTRTVQVP
LPNSTVVDAGRKSCGTDGSSPWLVAVFGSGHALGLSFLTNGILYSVANLTLQYNLSDASI
FPEANRSGVVIVVLPSVGISATINTTYRCMSPSTFGVGGAAVTFSDMRLEAYMPGNDLSP
TESVCTADQTSTTAPPTTAGTTTTAAPAPPPPGTPERGTYSVNNLNGTVCLLAQMGLQLN
VSYFSLSQNKTIQELVNLTPNLTRSSGSCEASSASLVLAQEGSSTLNFTFTLNSTSNKYH
LSGITLLANLSDATAPFSASNTSLDYLRSTLGHSYMCNAEQTLVVATTFSLNTFRLQVQP
FEVTTNQFATAEECQVDQDQMLIPIIVGAALAGLVLIVLIAYLIGRRRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagactctctcacgcggtggccgcgctcatcgtcgcctggtttgcggatttcggctgc
attcaggcggtcacccttaatgtgaccgaggggaacaccacctgcatcaaggctgatctc
tccgcaaccttctccatcacatacaacacctccagcagcacaagaacggtgcaggtccct
cttcccaactccaccgtggtcgacgcaggtcgcaaatcatgcggcacagacggtagctcg
ccatggctggtggcggtgtttggatcaggccacgcgctggggctgagcttcttaaccaac
ggcatcctgtacagtgttgctaacctgacgctgcagtacaacctcagcgacgcctccatc
ttcccggaggctaacagatccggcgtggtcattgtggttttgccttcagttgggatctcg
gcgacaatcaacaccacctaccgctgcatgagcccctccacttttggagttggcggagca
gctgtcaccttctccgatatgaggcttgaggcgtacatgccaggaaacgacctgagtccg
acagaaagcgtatgcacggcagatcagaccagcactacggctccacctaccactgccggc
acgacgaccaccgcagctccagcgccgcccccgccaggaacacccgagcggggaacctac
tcggtaaacaacctcaacggcactgtgtgcctcctggcccagatgggactgcagctcaac
gtctcctatttctctctatcgcagaacaagaccatccaagaattagtcaacctgactccc
aatctgacgcgttcatccggatcatgtgaagccagcagcgcttctttggttttggcacag
gagggaagcagcacgctcaacttcaccttcactctgaactccacgagcaacaagtaccac
ctgagtgggataactctgcttgctaatttgtcagatgcaactgcgcccttctcagccagc
aacactagtctggactacctacggagtacgttgggccactcctacatgtgcaacgcagag
caaactctggttgtcgcgacaaccttctctctcaacacattcagactgcaggtccaaccc
tttgaagtcaccaccaaccagtttgctacagcggaggagtgtcaggtggaccaagaccag
atgctcatccccatcattgtcggagcagctctcgccggcctggtgctgatcgtcctcatt
gcatatctgatcggcaggaggaggagccatgctggataccagaccatctga
DBGET
integrated database retrieval system
